Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3886 | 11881;11882;11883 | chr2:178741577;178741576;178741575 | chr2:179606304;179606303;179606302 |
N2AB | 3569 | 10930;10931;10932 | chr2:178741577;178741576;178741575 | chr2:179606304;179606303;179606302 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3523 | 10792;10793;10794 | chr2:178741577;178741576;178741575 | chr2:179606304;179606303;179606302 |
Novex-1 | 3648 | 11167;11168;11169 | chr2:178741577;178741576;178741575 | chr2:179606304;179606303;179606302 |
Novex-2 | 3715 | 11368;11369;11370 | chr2:178741577;178741576;178741575 | chr2:179606304;179606303;179606302 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1300492136 | 0.622 | 0.027 | D | 0.611 | 0.527 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
D/E | rs1300492136 | 0.622 | 0.027 | D | 0.611 | 0.527 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7541 | likely_pathogenic | 0.6909 | pathogenic | 2.01 | Highly Stabilizing | 0.117 | N | 0.736 | prob.delet. | D | 0.711650531 | None | None | N |
D/C | 0.9351 | likely_pathogenic | 0.9051 | pathogenic | 1.424 | Stabilizing | 0.935 | D | 0.813 | deleterious | None | None | None | None | N |
D/E | 0.6896 | likely_pathogenic | 0.6297 | pathogenic | -0.203 | Destabilizing | 0.027 | N | 0.611 | neutral | D | 0.663240541 | None | None | N |
D/F | 0.9294 | likely_pathogenic | 0.8937 | pathogenic | 2.424 | Highly Stabilizing | 0.235 | N | 0.81 | deleterious | None | None | None | None | N |
D/G | 0.7239 | likely_pathogenic | 0.6649 | pathogenic | 1.534 | Stabilizing | 0.062 | N | 0.676 | prob.neutral | D | 0.782618466 | None | None | N |
D/H | 0.7306 | likely_pathogenic | 0.6428 | pathogenic | 2.013 | Highly Stabilizing | 0.001 | N | 0.489 | neutral | D | 0.56628007 | None | None | N |
D/I | 0.9208 | likely_pathogenic | 0.8783 | pathogenic | 3.267 | Highly Stabilizing | 0.38 | N | 0.829 | deleterious | None | None | None | None | N |
D/K | 0.9095 | likely_pathogenic | 0.8804 | pathogenic | 1.358 | Stabilizing | 0.081 | N | 0.703 | prob.neutral | None | None | None | None | N |
D/L | 0.9062 | likely_pathogenic | 0.8705 | pathogenic | 3.267 | Highly Stabilizing | 0.149 | N | 0.784 | deleterious | None | None | None | None | N |
D/M | 0.9412 | likely_pathogenic | 0.9158 | pathogenic | 3.315 | Highly Stabilizing | 0.935 | D | 0.822 | deleterious | None | None | None | None | N |
D/N | 0.3629 | ambiguous | 0.3178 | benign | 0.479 | Stabilizing | None | N | 0.327 | neutral | D | 0.615645611 | None | None | N |
D/P | 0.9944 | likely_pathogenic | 0.9924 | pathogenic | 2.883 | Highly Stabilizing | 0.555 | D | 0.777 | deleterious | None | None | None | None | N |
D/Q | 0.8912 | likely_pathogenic | 0.853 | pathogenic | 0.927 | Stabilizing | 0.38 | N | 0.7 | prob.neutral | None | None | None | None | N |
D/R | 0.9276 | likely_pathogenic | 0.9062 | pathogenic | 0.978 | Stabilizing | 0.38 | N | 0.808 | deleterious | None | None | None | None | N |
D/S | 0.6684 | likely_pathogenic | 0.5947 | pathogenic | 0.258 | Stabilizing | 0.081 | N | 0.621 | neutral | None | None | None | None | N |
D/T | 0.8664 | likely_pathogenic | 0.8145 | pathogenic | 0.719 | Stabilizing | 0.081 | N | 0.703 | prob.neutral | None | None | None | None | N |
D/V | 0.8005 | likely_pathogenic | 0.7261 | pathogenic | 2.883 | Highly Stabilizing | 0.117 | N | 0.804 | deleterious | D | 0.747288915 | None | None | N |
D/W | 0.98 | likely_pathogenic | 0.9707 | pathogenic | 2.064 | Highly Stabilizing | 0.824 | D | 0.816 | deleterious | None | None | None | None | N |
D/Y | 0.5648 | likely_pathogenic | 0.4706 | ambiguous | 2.671 | Highly Stabilizing | None | N | 0.534 | neutral | D | 0.643659131 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.