Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3889 | 11890;11891;11892 | chr2:178741568;178741567;178741566 | chr2:179606295;179606294;179606293 |
N2AB | 3572 | 10939;10940;10941 | chr2:178741568;178741567;178741566 | chr2:179606295;179606294;179606293 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3526 | 10801;10802;10803 | chr2:178741568;178741567;178741566 | chr2:179606295;179606294;179606293 |
Novex-1 | 3651 | 11176;11177;11178 | chr2:178741568;178741567;178741566 | chr2:179606295;179606294;179606293 |
Novex-2 | 3718 | 11377;11378;11379 | chr2:178741568;178741567;178741566 | chr2:179606295;179606294;179606293 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.645 | N | 0.589 | 0.313 | None | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
E/D | rs377423256 | -0.874 | 0.006 | N | 0.391 | 0.091 | None | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | I | None | 1.24018E-04 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs377423256 | -0.874 | 0.006 | N | 0.391 | 0.091 | None | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | I | None | 1.93218E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
E/D | rs377423256 | -0.874 | 0.006 | N | 0.391 | 0.091 | None | gnomAD-4.0.0 | 1.05351E-05 | None | None | None | None | I | None | 1.86986E-04 | 1.66767E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.20195E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2243 | likely_benign | 0.2194 | benign | -1.323 | Destabilizing | 0.645 | D | 0.589 | neutral | N | 0.512583814 | None | None | I |
E/C | 0.8894 | likely_pathogenic | 0.879 | pathogenic | -0.592 | Destabilizing | 0.995 | D | 0.662 | neutral | None | None | None | None | I |
E/D | 0.2591 | likely_benign | 0.2455 | benign | -1.071 | Destabilizing | 0.006 | N | 0.391 | neutral | N | 0.511787403 | None | None | I |
E/F | 0.7478 | likely_pathogenic | 0.7538 | pathogenic | -0.703 | Destabilizing | 0.995 | D | 0.723 | prob.delet. | None | None | None | None | I |
E/G | 0.3157 | likely_benign | 0.2991 | benign | -1.717 | Destabilizing | 0.645 | D | 0.653 | neutral | D | 0.634152996 | None | None | I |
E/H | 0.575 | likely_pathogenic | 0.5785 | pathogenic | -0.903 | Destabilizing | 0.995 | D | 0.637 | neutral | None | None | None | None | I |
E/I | 0.3127 | likely_benign | 0.318 | benign | -0.22 | Destabilizing | 0.945 | D | 0.741 | deleterious | None | None | None | None | I |
E/K | 0.1386 | likely_benign | 0.136 | benign | -0.669 | Destabilizing | 0.006 | N | 0.402 | neutral | N | 0.503739005 | None | None | I |
E/L | 0.4407 | ambiguous | 0.4367 | ambiguous | -0.22 | Destabilizing | 0.894 | D | 0.738 | prob.delet. | None | None | None | None | I |
E/M | 0.4336 | ambiguous | 0.4321 | ambiguous | 0.441 | Stabilizing | 0.995 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/N | 0.3435 | ambiguous | 0.3317 | benign | -1.201 | Destabilizing | 0.809 | D | 0.635 | neutral | None | None | None | None | I |
E/P | 0.7643 | likely_pathogenic | 0.7887 | pathogenic | -0.569 | Destabilizing | 0.945 | D | 0.744 | deleterious | None | None | None | None | I |
E/Q | 0.1745 | likely_benign | 0.18 | benign | -1.045 | Destabilizing | 0.864 | D | 0.596 | neutral | N | 0.510546257 | None | None | I |
E/R | 0.2598 | likely_benign | 0.2679 | benign | -0.444 | Destabilizing | 0.809 | D | 0.633 | neutral | None | None | None | None | I |
E/S | 0.3051 | likely_benign | 0.3026 | benign | -1.653 | Destabilizing | 0.547 | D | 0.529 | neutral | None | None | None | None | I |
E/T | 0.2712 | likely_benign | 0.2679 | benign | -1.294 | Destabilizing | 0.894 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/V | 0.2236 | likely_benign | 0.2236 | benign | -0.569 | Destabilizing | 0.928 | D | 0.733 | prob.delet. | N | 0.472286066 | None | None | I |
E/W | 0.9057 | likely_pathogenic | 0.9109 | pathogenic | -0.348 | Destabilizing | 0.995 | D | 0.658 | neutral | None | None | None | None | I |
E/Y | 0.6454 | likely_pathogenic | 0.6484 | pathogenic | -0.389 | Destabilizing | 0.981 | D | 0.724 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.