Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3892 | 11899;11900;11901 | chr2:178741559;178741558;178741557 | chr2:179606286;179606285;179606284 |
N2AB | 3575 | 10948;10949;10950 | chr2:178741559;178741558;178741557 | chr2:179606286;179606285;179606284 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3529 | 10810;10811;10812 | chr2:178741559;178741558;178741557 | chr2:179606286;179606285;179606284 |
Novex-1 | 3654 | 11185;11186;11187 | chr2:178741559;178741558;178741557 | chr2:179606286;179606285;179606284 |
Novex-2 | 3721 | 11386;11387;11388 | chr2:178741559;178741558;178741557 | chr2:179606286;179606285;179606284 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | 1.0 | D | 0.835 | 0.708 | None | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85806E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.7666 | likely_pathogenic | 0.7941 | pathogenic | -1.558 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
C/D | 0.9977 | likely_pathogenic | 0.9984 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
C/E | 0.9986 | likely_pathogenic | 0.9989 | pathogenic | -1.231 | Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
C/F | 0.6889 | likely_pathogenic | 0.6997 | pathogenic | -0.902 | Destabilizing | 1.0 | D | 0.917 | deleterious | D | 0.781319746 | None | None | N |
C/G | 0.661 | likely_pathogenic | 0.7058 | pathogenic | -1.939 | Destabilizing | 1.0 | D | 0.908 | deleterious | D | 0.783992476 | None | None | N |
C/H | 0.9915 | likely_pathogenic | 0.9927 | pathogenic | -2.14 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
C/I | 0.8171 | likely_pathogenic | 0.7945 | pathogenic | -0.52 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
C/K | 0.9987 | likely_pathogenic | 0.999 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
C/L | 0.753 | likely_pathogenic | 0.7497 | pathogenic | -0.52 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
C/M | 0.936 | likely_pathogenic | 0.9311 | pathogenic | 0.332 | Stabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
C/N | 0.991 | likely_pathogenic | 0.9923 | pathogenic | -1.729 | Destabilizing | 1.0 | D | 0.93 | deleterious | None | None | None | None | N |
C/P | 0.9972 | likely_pathogenic | 0.9974 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
C/Q | 0.9953 | likely_pathogenic | 0.9963 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.936 | deleterious | None | None | None | None | N |
C/R | 0.9816 | likely_pathogenic | 0.9875 | pathogenic | -1.494 | Destabilizing | 1.0 | D | 0.935 | deleterious | D | 0.783992476 | None | None | N |
C/S | 0.8622 | likely_pathogenic | 0.8819 | pathogenic | -2.013 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.750512016 | None | None | N |
C/T | 0.9296 | likely_pathogenic | 0.9306 | pathogenic | -1.563 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
C/V | 0.6863 | likely_pathogenic | 0.6679 | pathogenic | -0.844 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
C/W | 0.9702 | likely_pathogenic | 0.9747 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.783992476 | None | None | N |
C/Y | 0.9161 | likely_pathogenic | 0.9235 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.929 | deleterious | D | 0.783992476 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.