Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3896 | 11911;11912;11913 | chr2:178741547;178741546;178741545 | chr2:179606274;179606273;179606272 |
N2AB | 3579 | 10960;10961;10962 | chr2:178741547;178741546;178741545 | chr2:179606274;179606273;179606272 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3533 | 10822;10823;10824 | chr2:178741547;178741546;178741545 | chr2:179606274;179606273;179606272 |
Novex-1 | 3658 | 11197;11198;11199 | chr2:178741547;178741546;178741545 | chr2:179606274;179606273;179606272 |
Novex-2 | 3725 | 11398;11399;11400 | chr2:178741547;178741546;178741545 | chr2:179606274;179606273;179606272 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1207560844 | None | 0.999 | D | 0.555 | 0.49 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs1207560844 | None | 0.999 | D | 0.555 | 0.49 | None | gnomAD-4.0.0 | 2.47863E-06 | None | None | None | None | I | None | 0 | 1.667E-05 | None | 0 | 0 | None | 0 | 0 | 2.54272E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9167 | likely_pathogenic | 0.8958 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
N/C | 0.7692 | likely_pathogenic | 0.7702 | pathogenic | -0.317 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
N/D | 0.699 | likely_pathogenic | 0.6463 | pathogenic | -1.428 | Destabilizing | 0.999 | D | 0.59 | neutral | D | 0.76427153 | None | None | I |
N/E | 0.9788 | likely_pathogenic | 0.9724 | pathogenic | -1.299 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
N/F | 0.9886 | likely_pathogenic | 0.9868 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
N/G | 0.8393 | likely_pathogenic | 0.8045 | pathogenic | -1.344 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | I |
N/H | 0.7386 | likely_pathogenic | 0.7215 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | D | 0.766670733 | None | None | I |
N/I | 0.9263 | likely_pathogenic | 0.9147 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | D | 0.767405593 | None | None | I |
N/K | 0.9663 | likely_pathogenic | 0.9629 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | D | 0.76576111 | None | None | I |
N/L | 0.8611 | likely_pathogenic | 0.8533 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
N/M | 0.9352 | likely_pathogenic | 0.923 | pathogenic | 0.364 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
N/P | 0.9768 | likely_pathogenic | 0.9755 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
N/Q | 0.9732 | likely_pathogenic | 0.9696 | pathogenic | -1.124 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
N/R | 0.9551 | likely_pathogenic | 0.9554 | pathogenic | -0.326 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
N/S | 0.2363 | likely_benign | 0.2154 | benign | -1.101 | Destabilizing | 0.999 | D | 0.555 | neutral | D | 0.567967795 | None | None | I |
N/T | 0.5989 | likely_pathogenic | 0.5202 | ambiguous | -0.792 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | D | 0.66317436 | None | None | I |
N/V | 0.9099 | likely_pathogenic | 0.8898 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
N/W | 0.9952 | likely_pathogenic | 0.9956 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
N/Y | 0.8907 | likely_pathogenic | 0.8927 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.766670733 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.