Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3898 | 11917;11918;11919 | chr2:178741541;178741540;178741539 | chr2:179606268;179606267;179606266 |
N2AB | 3581 | 10966;10967;10968 | chr2:178741541;178741540;178741539 | chr2:179606268;179606267;179606266 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3535 | 10828;10829;10830 | chr2:178741541;178741540;178741539 | chr2:179606268;179606267;179606266 |
Novex-1 | 3660 | 11203;11204;11205 | chr2:178741541;178741540;178741539 | chr2:179606268;179606267;179606266 |
Novex-2 | 3727 | 11404;11405;11406 | chr2:178741541;178741540;178741539 | chr2:179606268;179606267;179606266 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs747933911 | 0.324 | 0.987 | N | 0.507 | 0.339 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
Y/C | rs747933911 | 0.324 | 0.987 | N | 0.507 | 0.339 | None | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85801E-06 | 0 | 0 |
Y/D | rs1553941743 | None | 0.326 | N | 0.493 | 0.324 | None | gnomAD-4.0.0 | 4.77348E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57403E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.4409 | ambiguous | 0.3851 | ambiguous | -0.455 | Destabilizing | 0.345 | N | 0.529 | neutral | None | None | None | None | I |
Y/C | 0.112 | likely_benign | 0.1096 | benign | 0.283 | Stabilizing | 0.987 | D | 0.507 | neutral | N | 0.509689058 | None | None | I |
Y/D | 0.1689 | likely_benign | 0.1732 | benign | 0.767 | Stabilizing | 0.326 | N | 0.493 | neutral | N | 0.51008613 | None | None | I |
Y/E | 0.5377 | ambiguous | 0.4955 | ambiguous | 0.738 | Stabilizing | 0.345 | N | 0.484 | neutral | None | None | None | None | I |
Y/F | 0.1329 | likely_benign | 0.11 | benign | -0.276 | Destabilizing | 0.001 | N | 0.257 | neutral | N | 0.400155286 | None | None | I |
Y/G | 0.3648 | ambiguous | 0.3565 | ambiguous | -0.628 | Destabilizing | 0.209 | N | 0.513 | neutral | None | None | None | None | I |
Y/H | 0.1359 | likely_benign | 0.1176 | benign | 0.256 | Stabilizing | 0.001 | N | 0.269 | neutral | N | 0.442132062 | None | None | I |
Y/I | 0.4569 | ambiguous | 0.4167 | ambiguous | -0.03 | Destabilizing | 0.561 | D | 0.505 | neutral | None | None | None | None | I |
Y/K | 0.4428 | ambiguous | 0.3914 | ambiguous | 0.32 | Stabilizing | 0.561 | D | 0.499 | neutral | None | None | None | None | I |
Y/L | 0.4526 | ambiguous | 0.4326 | ambiguous | -0.03 | Destabilizing | 0.209 | N | 0.485 | neutral | None | None | None | None | I |
Y/M | 0.6156 | likely_pathogenic | 0.5911 | pathogenic | 0.024 | Stabilizing | 0.965 | D | 0.507 | neutral | None | None | None | None | I |
Y/N | 0.1191 | likely_benign | 0.1113 | benign | 0.151 | Stabilizing | 0.001 | N | 0.404 | neutral | N | 0.469938544 | None | None | I |
Y/P | 0.8836 | likely_pathogenic | 0.9022 | pathogenic | -0.152 | Destabilizing | 0.965 | D | 0.519 | neutral | None | None | None | None | I |
Y/Q | 0.4324 | ambiguous | 0.3737 | ambiguous | 0.195 | Stabilizing | 0.561 | D | 0.499 | neutral | None | None | None | None | I |
Y/R | 0.279 | likely_benign | 0.2505 | benign | 0.5 | Stabilizing | 0.561 | D | 0.537 | neutral | None | None | None | None | I |
Y/S | 0.1602 | likely_benign | 0.1459 | benign | -0.189 | Destabilizing | 0.166 | N | 0.505 | neutral | N | 0.474184349 | None | None | I |
Y/T | 0.3942 | ambiguous | 0.3611 | ambiguous | -0.126 | Destabilizing | 0.561 | D | 0.499 | neutral | None | None | None | None | I |
Y/V | 0.3812 | ambiguous | 0.3504 | ambiguous | -0.152 | Destabilizing | 0.561 | D | 0.469 | neutral | None | None | None | None | I |
Y/W | 0.4572 | ambiguous | 0.4632 | ambiguous | -0.482 | Destabilizing | 0.965 | D | 0.476 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.