Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3899 | 11920;11921;11922 | chr2:178741538;178741537;178741536 | chr2:179606265;179606264;179606263 |
N2AB | 3582 | 10969;10970;10971 | chr2:178741538;178741537;178741536 | chr2:179606265;179606264;179606263 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3536 | 10831;10832;10833 | chr2:178741538;178741537;178741536 | chr2:179606265;179606264;179606263 |
Novex-1 | 3661 | 11206;11207;11208 | chr2:178741538;178741537;178741536 | chr2:179606265;179606264;179606263 |
Novex-2 | 3728 | 11407;11408;11409 | chr2:178741538;178741537;178741536 | chr2:179606265;179606264;179606263 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 1.0 | D | 0.872 | 0.63 | None | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85806E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5007 | ambiguous | 0.471 | ambiguous | -0.486 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.730805163 | None | None | I |
G/C | 0.5398 | ambiguous | 0.5692 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/D | 0.6337 | likely_pathogenic | 0.6458 | pathogenic | -0.863 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
G/E | 0.5922 | likely_pathogenic | 0.5971 | pathogenic | -1.032 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.740964939 | None | None | I |
G/F | 0.9287 | likely_pathogenic | 0.9208 | pathogenic | -1.217 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
G/H | 0.8088 | likely_pathogenic | 0.8074 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
G/I | 0.8496 | likely_pathogenic | 0.8368 | pathogenic | -0.591 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
G/K | 0.7451 | likely_pathogenic | 0.7418 | pathogenic | -1.0 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
G/L | 0.8804 | likely_pathogenic | 0.8693 | pathogenic | -0.591 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
G/M | 0.9041 | likely_pathogenic | 0.8944 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/N | 0.7451 | likely_pathogenic | 0.7227 | pathogenic | -0.566 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
G/P | 0.988 | likely_pathogenic | 0.9883 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
G/Q | 0.6414 | likely_pathogenic | 0.64 | pathogenic | -0.902 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
G/R | 0.5015 | ambiguous | 0.5191 | ambiguous | -0.483 | Destabilizing | 1.0 | D | 0.872 | deleterious | D | 0.749112808 | None | None | I |
G/S | 0.2943 | likely_benign | 0.2727 | benign | -0.686 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
G/T | 0.686 | likely_pathogenic | 0.653 | pathogenic | -0.797 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
G/V | 0.7589 | likely_pathogenic | 0.7476 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.830391993 | None | None | I |
G/W | 0.7858 | likely_pathogenic | 0.8043 | pathogenic | -1.364 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
G/Y | 0.8496 | likely_pathogenic | 0.8506 | pathogenic | -1.033 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.