Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3900 | 11923;11924;11925 | chr2:178741535;178741534;178741533 | chr2:179606262;179606261;179606260 |
N2AB | 3583 | 10972;10973;10974 | chr2:178741535;178741534;178741533 | chr2:179606262;179606261;179606260 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3537 | 10834;10835;10836 | chr2:178741535;178741534;178741533 | chr2:179606262;179606261;179606260 |
Novex-1 | 3662 | 11209;11210;11211 | chr2:178741535;178741534;178741533 | chr2:179606262;179606261;179606260 |
Novex-2 | 3729 | 11410;11411;11412 | chr2:178741535;178741534;178741533 | chr2:179606262;179606261;179606260 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.055 | N | 0.335 | 0.192 | None | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85802E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.333 | likely_benign | 0.2772 | benign | -0.216 | Destabilizing | 0.016 | N | 0.439 | neutral | None | None | None | None | I |
K/C | 0.645 | likely_pathogenic | 0.6246 | pathogenic | -0.273 | Destabilizing | 0.864 | D | 0.485 | neutral | None | None | None | None | I |
K/D | 0.4248 | ambiguous | 0.3738 | ambiguous | 0.102 | Stabilizing | 0.016 | N | 0.471 | neutral | None | None | None | None | I |
K/E | 0.0943 | likely_benign | 0.0814 | benign | 0.136 | Stabilizing | None | N | 0.137 | neutral | N | 0.417185629 | None | None | I |
K/F | 0.7071 | likely_pathogenic | 0.6442 | pathogenic | -0.262 | Destabilizing | 0.628 | D | 0.487 | neutral | None | None | None | None | I |
K/G | 0.4145 | ambiguous | 0.3638 | ambiguous | -0.471 | Destabilizing | 0.072 | N | 0.497 | neutral | None | None | None | None | I |
K/H | 0.3031 | likely_benign | 0.2659 | benign | -0.771 | Destabilizing | 0.214 | N | 0.471 | neutral | None | None | None | None | I |
K/I | 0.2872 | likely_benign | 0.2414 | benign | 0.395 | Stabilizing | 0.356 | N | 0.491 | neutral | None | None | None | None | I |
K/L | 0.3304 | likely_benign | 0.2782 | benign | 0.395 | Stabilizing | 0.072 | N | 0.498 | neutral | None | None | None | None | I |
K/M | 0.1739 | likely_benign | 0.1452 | benign | 0.241 | Stabilizing | 0.295 | N | 0.481 | neutral | N | 0.520520526 | None | None | I |
K/N | 0.2388 | likely_benign | 0.1978 | benign | 0.072 | Stabilizing | 0.055 | N | 0.335 | neutral | N | 0.510430258 | None | None | I |
K/P | 0.8373 | likely_pathogenic | 0.7873 | pathogenic | 0.221 | Stabilizing | 0.136 | N | 0.497 | neutral | None | None | None | None | I |
K/Q | 0.101 | likely_benign | 0.0901 | benign | -0.091 | Destabilizing | None | N | 0.136 | neutral | N | 0.474133832 | None | None | I |
K/R | 0.0886 | likely_benign | 0.0832 | benign | -0.188 | Destabilizing | None | N | 0.135 | neutral | N | 0.504987924 | None | None | I |
K/S | 0.2981 | likely_benign | 0.2482 | benign | -0.499 | Destabilizing | 0.016 | N | 0.382 | neutral | None | None | None | None | I |
K/T | 0.1368 | likely_benign | 0.1108 | benign | -0.294 | Destabilizing | 0.055 | N | 0.449 | neutral | N | 0.471048417 | None | None | I |
K/V | 0.2859 | likely_benign | 0.2413 | benign | 0.221 | Stabilizing | 0.072 | N | 0.512 | neutral | None | None | None | None | I |
K/W | 0.7296 | likely_pathogenic | 0.6815 | pathogenic | -0.203 | Destabilizing | 0.864 | D | 0.491 | neutral | None | None | None | None | I |
K/Y | 0.5249 | ambiguous | 0.4771 | ambiguous | 0.117 | Stabilizing | 0.356 | N | 0.486 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.