Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3901 | 11926;11927;11928 | chr2:178741532;178741531;178741530 | chr2:179606259;179606258;179606257 |
N2AB | 3584 | 10975;10976;10977 | chr2:178741532;178741531;178741530 | chr2:179606259;179606258;179606257 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3538 | 10837;10838;10839 | chr2:178741532;178741531;178741530 | chr2:179606259;179606258;179606257 |
Novex-1 | 3663 | 11212;11213;11214 | chr2:178741532;178741531;178741530 | chr2:179606259;179606258;179606257 |
Novex-2 | 3730 | 11413;11414;11415 | chr2:178741532;178741531;178741530 | chr2:179606259;179606258;179606257 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1388046179 | 0.102 | None | N | 0.328 | 0.216 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/I | rs1388046179 | 0.102 | None | N | 0.328 | 0.216 | None | gnomAD-4.0.0 | 1.36839E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79889E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0673 | likely_benign | 0.0626 | benign | -0.824 | Destabilizing | None | N | 0.109 | neutral | N | 0.386442687 | None | None | I |
T/C | 0.4007 | ambiguous | 0.4181 | ambiguous | -0.478 | Destabilizing | 0.356 | N | 0.569 | neutral | None | None | None | None | I |
T/D | 0.3419 | ambiguous | 0.3046 | benign | -0.199 | Destabilizing | 0.072 | N | 0.634 | neutral | None | None | None | None | I |
T/E | 0.2713 | likely_benign | 0.2489 | benign | -0.117 | Destabilizing | 0.038 | N | 0.578 | neutral | None | None | None | None | I |
T/F | 0.3107 | likely_benign | 0.2858 | benign | -0.643 | Destabilizing | 0.214 | N | 0.707 | prob.neutral | None | None | None | None | I |
T/G | 0.2722 | likely_benign | 0.25 | benign | -1.157 | Destabilizing | 0.016 | N | 0.636 | neutral | None | None | None | None | I |
T/H | 0.2985 | likely_benign | 0.2807 | benign | -1.254 | Destabilizing | 0.676 | D | 0.653 | neutral | None | None | None | None | I |
T/I | 0.1901 | likely_benign | 0.1732 | benign | -0.001 | Destabilizing | None | N | 0.328 | neutral | N | 0.473029838 | None | None | I |
T/K | 0.2087 | likely_benign | 0.202 | benign | -0.551 | Destabilizing | 0.029 | N | 0.577 | neutral | N | 0.499866909 | None | None | I |
T/L | 0.1593 | likely_benign | 0.1489 | benign | -0.001 | Destabilizing | 0.006 | N | 0.474 | neutral | None | None | None | None | I |
T/M | 0.0965 | likely_benign | 0.094 | benign | 0.004 | Stabilizing | 0.007 | N | 0.385 | neutral | None | None | None | None | I |
T/N | 0.1283 | likely_benign | 0.1182 | benign | -0.733 | Destabilizing | 0.038 | N | 0.559 | neutral | None | None | None | None | I |
T/P | 0.6664 | likely_pathogenic | 0.5906 | pathogenic | -0.242 | Destabilizing | 0.171 | N | 0.625 | neutral | N | 0.511338012 | None | None | I |
T/Q | 0.2246 | likely_benign | 0.2265 | benign | -0.703 | Destabilizing | 0.214 | N | 0.626 | neutral | None | None | None | None | I |
T/R | 0.1485 | likely_benign | 0.1415 | benign | -0.475 | Destabilizing | 0.171 | N | 0.623 | neutral | N | 0.490463026 | None | None | I |
T/S | 0.1222 | likely_benign | 0.1127 | benign | -1.044 | Destabilizing | None | N | 0.135 | neutral | N | 0.434813878 | None | None | I |
T/V | 0.1503 | likely_benign | 0.1397 | benign | -0.242 | Destabilizing | 0.006 | N | 0.399 | neutral | None | None | None | None | I |
T/W | 0.6823 | likely_pathogenic | 0.6767 | pathogenic | -0.661 | Destabilizing | 0.864 | D | 0.668 | neutral | None | None | None | None | I |
T/Y | 0.2979 | likely_benign | 0.2881 | benign | -0.373 | Destabilizing | 0.356 | N | 0.691 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.