Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3902 | 11929;11930;11931 | chr2:178741529;178741528;178741527 | chr2:179606256;179606255;179606254 |
N2AB | 3585 | 10978;10979;10980 | chr2:178741529;178741528;178741527 | chr2:179606256;179606255;179606254 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3539 | 10840;10841;10842 | chr2:178741529;178741528;178741527 | chr2:179606256;179606255;179606254 |
Novex-1 | 3664 | 11215;11216;11217 | chr2:178741529;178741528;178741527 | chr2:179606256;179606255;179606254 |
Novex-2 | 3731 | 11416;11417;11418 | chr2:178741529;178741528;178741527 | chr2:179606256;179606255;179606254 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs368845723 | -0.233 | None | N | 0.205 | 0.105 | None | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
I/M | rs368845723 | -0.233 | None | N | 0.205 | 0.105 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
I/M | rs368845723 | -0.233 | None | N | 0.205 | 0.105 | None | gnomAD-4.0.0 | 4.95726E-06 | None | None | None | None | I | None | 4.00299E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.23791E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1666 | likely_benign | 0.1349 | benign | -1.257 | Destabilizing | None | N | 0.208 | neutral | None | None | None | None | I |
I/C | 0.5126 | ambiguous | 0.4699 | ambiguous | -0.592 | Destabilizing | 0.132 | N | 0.453 | neutral | None | None | None | None | I |
I/D | 0.426 | ambiguous | 0.3508 | ambiguous | -0.612 | Destabilizing | 0.009 | N | 0.353 | neutral | None | None | None | None | I |
I/E | 0.3088 | likely_benign | 0.2593 | benign | -0.658 | Destabilizing | 0.002 | N | 0.363 | neutral | None | None | None | None | I |
I/F | 0.1258 | likely_benign | 0.1082 | benign | -1.0 | Destabilizing | 0.021 | N | 0.431 | neutral | None | None | None | None | I |
I/G | 0.429 | ambiguous | 0.355 | ambiguous | -1.518 | Destabilizing | None | N | 0.378 | neutral | None | None | None | None | I |
I/H | 0.314 | likely_benign | 0.2777 | benign | -0.716 | Destabilizing | 0.132 | N | 0.507 | neutral | None | None | None | None | I |
I/K | 0.1989 | likely_benign | 0.1748 | benign | -0.712 | Destabilizing | 0.001 | N | 0.365 | neutral | N | 0.441381949 | None | None | I |
I/L | 0.1072 | likely_benign | 0.0955 | benign | -0.647 | Destabilizing | None | N | 0.185 | neutral | N | 0.450821427 | None | None | I |
I/M | 0.091 | likely_benign | 0.0815 | benign | -0.442 | Destabilizing | None | N | 0.205 | neutral | N | 0.485866674 | None | None | I |
I/N | 0.1426 | likely_benign | 0.1241 | benign | -0.419 | Destabilizing | 0.009 | N | 0.361 | neutral | None | None | None | None | I |
I/P | 0.688 | likely_pathogenic | 0.5916 | pathogenic | -0.818 | Destabilizing | 0.018 | N | 0.406 | neutral | None | None | None | None | I |
I/Q | 0.2595 | likely_benign | 0.229 | benign | -0.641 | Destabilizing | None | N | 0.418 | neutral | None | None | None | None | I |
I/R | 0.142 | likely_benign | 0.1228 | benign | -0.098 | Destabilizing | None | N | 0.415 | neutral | N | 0.383227261 | None | None | I |
I/S | 0.1362 | likely_benign | 0.1159 | benign | -0.965 | Destabilizing | None | N | 0.316 | neutral | None | None | None | None | I |
I/T | 0.0909 | likely_benign | 0.0773 | benign | -0.897 | Destabilizing | None | N | 0.199 | neutral | N | 0.361178016 | None | None | I |
I/V | 0.0668 | likely_benign | 0.0636 | benign | -0.818 | Destabilizing | None | N | 0.103 | neutral | N | 0.444503174 | None | None | I |
I/W | 0.6463 | likely_pathogenic | 0.606 | pathogenic | -1.027 | Destabilizing | 0.316 | N | 0.427 | neutral | None | None | None | None | I |
I/Y | 0.3412 | ambiguous | 0.3137 | benign | -0.803 | Destabilizing | 0.041 | N | 0.504 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.