Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3903 | 11932;11933;11934 | chr2:178741526;178741525;178741524 | chr2:179606253;179606252;179606251 |
N2AB | 3586 | 10981;10982;10983 | chr2:178741526;178741525;178741524 | chr2:179606253;179606252;179606251 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3540 | 10843;10844;10845 | chr2:178741526;178741525;178741524 | chr2:179606253;179606252;179606251 |
Novex-1 | 3665 | 11218;11219;11220 | chr2:178741526;178741525;178741524 | chr2:179606253;179606252;179606251 |
Novex-2 | 3732 | 11419;11420;11421 | chr2:178741526;178741525;178741524 | chr2:179606253;179606252;179606251 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | None | None | 0.901 | N | 0.881 | 0.457 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5964 | likely_pathogenic | 0.5898 | pathogenic | -1.636 | Destabilizing | 0.415 | N | 0.592 | neutral | None | None | None | None | I |
C/D | 0.9254 | likely_pathogenic | 0.9258 | pathogenic | 0.03 | Stabilizing | 0.923 | D | 0.847 | deleterious | None | None | None | None | I |
C/E | 0.9683 | likely_pathogenic | 0.9649 | pathogenic | 0.149 | Stabilizing | 0.923 | D | 0.869 | deleterious | None | None | None | None | I |
C/F | 0.5734 | likely_pathogenic | 0.548 | ambiguous | -1.012 | Destabilizing | 0.949 | D | 0.827 | deleterious | D | 0.63847793 | None | None | I |
C/G | 0.3525 | ambiguous | 0.3359 | benign | -1.952 | Destabilizing | 0.565 | D | 0.816 | deleterious | N | 0.50917363 | None | None | I |
C/H | 0.8336 | likely_pathogenic | 0.8166 | pathogenic | -1.913 | Destabilizing | 0.989 | D | 0.844 | deleterious | None | None | None | None | I |
C/I | 0.8156 | likely_pathogenic | 0.779 | pathogenic | -0.82 | Destabilizing | 0.961 | D | 0.802 | deleterious | None | None | None | None | I |
C/K | 0.9483 | likely_pathogenic | 0.9463 | pathogenic | -0.623 | Destabilizing | 0.858 | D | 0.837 | deleterious | None | None | None | None | I |
C/L | 0.794 | likely_pathogenic | 0.7736 | pathogenic | -0.82 | Destabilizing | 0.775 | D | 0.728 | prob.delet. | None | None | None | None | I |
C/M | 0.9197 | likely_pathogenic | 0.9032 | pathogenic | -0.004 | Destabilizing | 0.996 | D | 0.801 | deleterious | None | None | None | None | I |
C/N | 0.8448 | likely_pathogenic | 0.8195 | pathogenic | -0.703 | Destabilizing | 0.858 | D | 0.871 | deleterious | None | None | None | None | I |
C/P | 0.9936 | likely_pathogenic | 0.9934 | pathogenic | -1.065 | Destabilizing | 0.961 | D | 0.881 | deleterious | None | None | None | None | I |
C/Q | 0.8911 | likely_pathogenic | 0.8786 | pathogenic | -0.538 | Destabilizing | 0.923 | D | 0.879 | deleterious | None | None | None | None | I |
C/R | 0.6926 | likely_pathogenic | 0.7009 | pathogenic | -0.622 | Destabilizing | 0.901 | D | 0.881 | deleterious | N | 0.507473517 | None | None | I |
C/S | 0.4407 | ambiguous | 0.3875 | ambiguous | -1.272 | Destabilizing | 0.034 | N | 0.525 | neutral | N | 0.475347172 | None | None | I |
C/T | 0.684 | likely_pathogenic | 0.6173 | pathogenic | -0.954 | Destabilizing | 0.633 | D | 0.75 | deleterious | None | None | None | None | I |
C/V | 0.7468 | likely_pathogenic | 0.7078 | pathogenic | -1.065 | Destabilizing | 0.775 | D | 0.786 | deleterious | None | None | None | None | I |
C/W | 0.8892 | likely_pathogenic | 0.8733 | pathogenic | -1.0 | Destabilizing | 0.995 | D | 0.801 | deleterious | N | 0.507875839 | None | None | I |
C/Y | 0.7132 | likely_pathogenic | 0.6991 | pathogenic | -0.962 | Destabilizing | 0.983 | D | 0.833 | deleterious | D | 0.615647741 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.