Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3939 | 12040;12041;12042 | chr2:178741418;178741417;178741416 | chr2:179606145;179606144;179606143 |
N2AB | 3622 | 11089;11090;11091 | chr2:178741418;178741417;178741416 | chr2:179606145;179606144;179606143 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3576 | 10951;10952;10953 | chr2:178741418;178741417;178741416 | chr2:179606145;179606144;179606143 |
Novex-1 | 3701 | 11326;11327;11328 | chr2:178741418;178741417;178741416 | chr2:179606145;179606144;179606143 |
Novex-2 | 3768 | 11527;11528;11529 | chr2:178741418;178741417;178741416 | chr2:179606145;179606144;179606143 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | None | None | 0.013 | N | 0.309 | 0.12 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
H/Y | None | None | None | N | 0.097 | 0.115 | None | gnomAD-4.0.0 | 1.59108E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1882 | likely_benign | 0.1876 | benign | -0.218 | Destabilizing | None | N | 0.272 | neutral | None | None | None | None | I |
H/C | 0.0889 | likely_benign | 0.094 | benign | 0.187 | Stabilizing | None | N | 0.29 | neutral | None | None | None | None | I |
H/D | 0.1879 | likely_benign | 0.181 | benign | -0.487 | Destabilizing | 0.003 | N | 0.258 | neutral | N | 0.430596323 | None | None | I |
H/E | 0.2181 | likely_benign | 0.2167 | benign | -0.412 | Destabilizing | 0.002 | N | 0.203 | neutral | None | None | None | None | I |
H/F | 0.1502 | likely_benign | 0.1638 | benign | 0.914 | Stabilizing | None | N | 0.207 | neutral | None | None | None | None | I |
H/G | 0.2497 | likely_benign | 0.2502 | benign | -0.539 | Destabilizing | 0.001 | N | 0.31 | neutral | None | None | None | None | I |
H/I | 0.1563 | likely_benign | 0.1578 | benign | 0.643 | Stabilizing | None | N | 0.311 | neutral | None | None | None | None | I |
H/K | 0.1939 | likely_benign | 0.1931 | benign | -0.192 | Destabilizing | None | N | 0.176 | neutral | None | None | None | None | I |
H/L | 0.0952 | likely_benign | 0.0936 | benign | 0.643 | Stabilizing | None | N | 0.346 | neutral | N | 0.456861703 | None | None | I |
H/M | 0.3401 | ambiguous | 0.3457 | ambiguous | 0.28 | Stabilizing | 0.021 | N | 0.45 | neutral | None | None | None | None | I |
H/N | 0.111 | likely_benign | 0.1068 | benign | -0.501 | Destabilizing | 0.003 | N | 0.197 | neutral | N | 0.438083607 | None | None | I |
H/P | 0.4716 | ambiguous | 0.4219 | ambiguous | 0.378 | Stabilizing | 0.013 | N | 0.309 | neutral | N | 0.506351438 | None | None | I |
H/Q | 0.1298 | likely_benign | 0.1339 | benign | -0.309 | Destabilizing | 0.003 | N | 0.208 | neutral | N | 0.418841012 | None | None | I |
H/R | 0.0827 | likely_benign | 0.0832 | benign | -0.72 | Destabilizing | None | N | 0.15 | neutral | N | 0.381555337 | None | None | I |
H/S | 0.1435 | likely_benign | 0.1484 | benign | -0.415 | Destabilizing | None | N | 0.169 | neutral | None | None | None | None | I |
H/T | 0.1618 | likely_benign | 0.1677 | benign | -0.229 | Destabilizing | None | N | 0.211 | neutral | None | None | None | None | I |
H/V | 0.1392 | likely_benign | 0.1412 | benign | 0.378 | Stabilizing | None | N | 0.283 | neutral | None | None | None | None | I |
H/W | 0.2392 | likely_benign | 0.2504 | benign | 1.102 | Stabilizing | 0.132 | N | 0.42 | neutral | None | None | None | None | I |
H/Y | 0.0485 | likely_benign | 0.051 | benign | 1.171 | Stabilizing | None | N | 0.097 | neutral | N | 0.35705943 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.