Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3941 | 12046;12047;12048 | chr2:178741412;178741411;178741410 | chr2:179606139;179606138;179606137 |
N2AB | 3624 | 11095;11096;11097 | chr2:178741412;178741411;178741410 | chr2:179606139;179606138;179606137 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3578 | 10957;10958;10959 | chr2:178741412;178741411;178741410 | chr2:179606139;179606138;179606137 |
Novex-1 | 3703 | 11332;11333;11334 | chr2:178741412;178741411;178741410 | chr2:179606139;179606138;179606137 |
Novex-2 | 3770 | 11533;11534;11535 | chr2:178741412;178741411;178741410 | chr2:179606139;179606138;179606137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 0.822 | N | 0.259 | 0.125 | None | gnomAD-4.0.0 | 1.5911E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85791E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2188 | likely_benign | 0.2115 | benign | -1.06 | Destabilizing | None | N | 0.127 | neutral | None | None | None | None | I |
L/C | 0.331 | likely_benign | 0.3247 | benign | -0.634 | Destabilizing | 0.667 | D | 0.273 | neutral | None | None | None | None | I |
L/D | 0.543 | ambiguous | 0.5222 | ambiguous | -0.68 | Destabilizing | 0.22 | N | 0.339 | neutral | None | None | None | None | I |
L/E | 0.2307 | likely_benign | 0.2179 | benign | -0.726 | Destabilizing | 0.22 | N | 0.332 | neutral | None | None | None | None | I |
L/F | 0.1059 | likely_benign | 0.1055 | benign | -0.79 | Destabilizing | 0.001 | N | 0.123 | neutral | N | 0.490745615 | None | None | I |
L/G | 0.437 | ambiguous | 0.4233 | ambiguous | -1.303 | Destabilizing | 0.055 | N | 0.244 | neutral | None | None | None | None | I |
L/H | 0.156 | likely_benign | 0.154 | benign | -0.481 | Destabilizing | 0.822 | D | 0.259 | neutral | N | 0.445563678 | None | None | I |
L/I | 0.0751 | likely_benign | 0.0756 | benign | -0.503 | Destabilizing | 0.001 | N | 0.101 | neutral | N | 0.420645027 | None | None | I |
L/K | 0.2055 | likely_benign | 0.1966 | benign | -0.757 | Destabilizing | 0.22 | N | 0.321 | neutral | None | None | None | None | I |
L/M | 0.1294 | likely_benign | 0.1268 | benign | -0.457 | Destabilizing | 0.497 | N | 0.276 | neutral | None | None | None | None | I |
L/N | 0.3315 | likely_benign | 0.3108 | benign | -0.533 | Destabilizing | 0.22 | N | 0.347 | neutral | None | None | None | None | I |
L/P | 0.3538 | ambiguous | 0.3708 | ambiguous | -0.657 | Destabilizing | 0.001 | N | 0.199 | neutral | D | 0.575014338 | None | None | I |
L/Q | 0.1046 | likely_benign | 0.1054 | benign | -0.738 | Destabilizing | 0.667 | D | 0.335 | neutral | None | None | None | None | I |
L/R | 0.1308 | likely_benign | 0.1278 | benign | -0.134 | Destabilizing | 0.602 | D | 0.354 | neutral | N | 0.458663396 | None | None | I |
L/S | 0.1703 | likely_benign | 0.1618 | benign | -1.013 | Destabilizing | 0.011 | N | 0.169 | neutral | None | None | None | None | I |
L/T | 0.1719 | likely_benign | 0.1614 | benign | -0.95 | Destabilizing | 0.004 | N | 0.147 | neutral | None | None | None | None | I |
L/V | 0.0857 | likely_benign | 0.0865 | benign | -0.657 | Destabilizing | None | N | 0.143 | neutral | N | 0.427769006 | None | None | I |
L/W | 0.1562 | likely_benign | 0.1531 | benign | -0.839 | Destabilizing | 0.883 | D | 0.255 | neutral | None | None | None | None | I |
L/Y | 0.2559 | likely_benign | 0.2508 | benign | -0.618 | Destabilizing | 0.124 | N | 0.355 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.