Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3944 | 12055;12056;12057 | chr2:178741403;178741402;178741401 | chr2:179606130;179606129;179606128 |
N2AB | 3627 | 11104;11105;11106 | chr2:178741403;178741402;178741401 | chr2:179606130;179606129;179606128 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3581 | 10966;10967;10968 | chr2:178741403;178741402;178741401 | chr2:179606130;179606129;179606128 |
Novex-1 | 3706 | 11341;11342;11343 | chr2:178741403;178741402;178741401 | chr2:179606130;179606129;179606128 |
Novex-2 | 3773 | 11542;11543;11544 | chr2:178741403;178741402;178741401 | chr2:179606130;179606129;179606128 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.117 | D | 0.693 | 0.263 | None | gnomAD-4.0.0 | 1.36835E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79886E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7631 | likely_pathogenic | 0.6824 | pathogenic | -2.381 | Highly Destabilizing | 0.035 | N | 0.586 | neutral | None | None | None | None | N |
L/C | 0.7427 | likely_pathogenic | 0.7136 | pathogenic | -1.464 | Destabilizing | 0.935 | D | 0.666 | neutral | None | None | None | None | N |
L/D | 0.9791 | likely_pathogenic | 0.9663 | pathogenic | -2.578 | Highly Destabilizing | 0.555 | D | 0.747 | deleterious | None | None | None | None | N |
L/E | 0.9079 | likely_pathogenic | 0.8594 | pathogenic | -2.346 | Highly Destabilizing | 0.38 | N | 0.735 | prob.delet. | None | None | None | None | N |
L/F | 0.1507 | likely_benign | 0.1636 | benign | -1.342 | Destabilizing | 0.001 | N | 0.437 | neutral | N | 0.488034857 | None | None | N |
L/G | 0.9058 | likely_pathogenic | 0.866 | pathogenic | -2.925 | Highly Destabilizing | 0.38 | N | 0.733 | prob.delet. | None | None | None | None | N |
L/H | 0.7755 | likely_pathogenic | 0.7267 | pathogenic | -2.269 | Highly Destabilizing | 0.824 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/I | 0.1339 | likely_benign | 0.1281 | benign | -0.807 | Destabilizing | 0.001 | N | 0.181 | neutral | N | 0.459292789 | None | None | N |
L/K | 0.8569 | likely_pathogenic | 0.7946 | pathogenic | -1.76 | Destabilizing | 0.38 | N | 0.707 | prob.neutral | None | None | None | None | N |
L/M | 0.1641 | likely_benign | 0.1748 | benign | -0.676 | Destabilizing | 0.555 | D | 0.631 | neutral | None | None | None | None | N |
L/N | 0.9059 | likely_pathogenic | 0.8565 | pathogenic | -2.078 | Highly Destabilizing | 0.555 | D | 0.74 | deleterious | None | None | None | None | N |
L/P | 0.5933 | likely_pathogenic | 0.3967 | ambiguous | -1.313 | Destabilizing | 0.001 | N | 0.615 | neutral | None | None | None | None | N |
L/Q | 0.7213 | likely_pathogenic | 0.6358 | pathogenic | -1.946 | Destabilizing | 0.555 | D | 0.678 | prob.neutral | None | None | None | None | N |
L/R | 0.7739 | likely_pathogenic | 0.6942 | pathogenic | -1.509 | Destabilizing | 0.555 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/S | 0.896 | likely_pathogenic | 0.8456 | pathogenic | -2.773 | Highly Destabilizing | 0.117 | N | 0.693 | prob.neutral | D | 0.557151508 | None | None | N |
L/T | 0.7926 | likely_pathogenic | 0.7058 | pathogenic | -2.392 | Highly Destabilizing | 0.149 | N | 0.654 | neutral | None | None | None | None | N |
L/V | 0.2094 | likely_benign | 0.1804 | benign | -1.313 | Destabilizing | None | N | 0.215 | neutral | D | 0.54734741 | None | None | N |
L/W | 0.4485 | ambiguous | 0.4683 | ambiguous | -1.696 | Destabilizing | 0.824 | D | 0.673 | neutral | None | None | None | None | N |
L/Y | 0.6602 | likely_pathogenic | 0.6657 | pathogenic | -1.391 | Destabilizing | 0.235 | N | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.