Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3947 | 12064;12065;12066 | chr2:178741394;178741393;178741392 | chr2:179606121;179606120;179606119 |
N2AB | 3630 | 11113;11114;11115 | chr2:178741394;178741393;178741392 | chr2:179606121;179606120;179606119 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3584 | 10975;10976;10977 | chr2:178741394;178741393;178741392 | chr2:179606121;179606120;179606119 |
Novex-1 | 3709 | 11350;11351;11352 | chr2:178741394;178741393;178741392 | chr2:179606121;179606120;179606119 |
Novex-2 | 3776 | 11551;11552;11553 | chr2:178741394;178741393;178741392 | chr2:179606121;179606120;179606119 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.171 | N | 0.376 | 0.078 | None | gnomAD-4.0.0 | 1.59106E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3115 | likely_benign | 0.3254 | benign | -1.671 | Destabilizing | None | N | 0.156 | neutral | None | None | None | None | N |
I/C | 0.6392 | likely_pathogenic | 0.6442 | pathogenic | -0.787 | Destabilizing | 0.356 | N | 0.37 | neutral | None | None | None | None | N |
I/D | 0.7647 | likely_pathogenic | 0.7678 | pathogenic | -1.132 | Destabilizing | 0.072 | N | 0.523 | neutral | None | None | None | None | N |
I/E | 0.5839 | likely_pathogenic | 0.5946 | pathogenic | -1.075 | Destabilizing | 0.072 | N | 0.474 | neutral | None | None | None | None | N |
I/F | 0.1931 | likely_benign | 0.1994 | benign | -1.036 | Destabilizing | 0.055 | N | 0.334 | neutral | N | 0.515177549 | None | None | N |
I/G | 0.6425 | likely_pathogenic | 0.6378 | pathogenic | -2.045 | Highly Destabilizing | 0.016 | N | 0.369 | neutral | None | None | None | None | N |
I/H | 0.5829 | likely_pathogenic | 0.5867 | pathogenic | -1.318 | Destabilizing | 0.628 | D | 0.424 | neutral | None | None | None | None | N |
I/K | 0.4348 | ambiguous | 0.4446 | ambiguous | -1.112 | Destabilizing | 0.072 | N | 0.455 | neutral | None | None | None | None | N |
I/L | 0.1249 | likely_benign | 0.1239 | benign | -0.687 | Destabilizing | None | N | 0.059 | neutral | N | 0.492856004 | None | None | N |
I/M | 0.1206 | likely_benign | 0.1264 | benign | -0.493 | Destabilizing | 0.171 | N | 0.376 | neutral | N | 0.513947109 | None | None | N |
I/N | 0.3523 | ambiguous | 0.3695 | ambiguous | -0.964 | Destabilizing | 0.055 | N | 0.523 | neutral | N | 0.507003817 | None | None | N |
I/P | 0.8599 | likely_pathogenic | 0.8408 | pathogenic | -0.985 | Destabilizing | 0.136 | N | 0.511 | neutral | None | None | None | None | N |
I/Q | 0.46 | ambiguous | 0.4715 | ambiguous | -1.055 | Destabilizing | 0.356 | N | 0.535 | neutral | None | None | None | None | N |
I/R | 0.3181 | likely_benign | 0.3291 | benign | -0.636 | Destabilizing | 0.356 | N | 0.545 | neutral | None | None | None | None | N |
I/S | 0.3247 | likely_benign | 0.3451 | ambiguous | -1.585 | Destabilizing | 0.001 | N | 0.303 | neutral | N | 0.503273066 | None | None | N |
I/T | 0.247 | likely_benign | 0.2667 | benign | -1.408 | Destabilizing | 0.012 | N | 0.342 | neutral | N | 0.479524621 | None | None | N |
I/V | 0.0623 | likely_benign | 0.0599 | benign | -0.985 | Destabilizing | None | N | 0.057 | neutral | N | 0.413437524 | None | None | N |
I/W | 0.8277 | likely_pathogenic | 0.8215 | pathogenic | -1.204 | Destabilizing | 0.864 | D | 0.449 | neutral | None | None | None | None | N |
I/Y | 0.5485 | ambiguous | 0.5645 | pathogenic | -0.947 | Destabilizing | 0.356 | N | 0.465 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.