Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3957 | 12094;12095;12096 | chr2:178741364;178741363;178741362 | chr2:179606091;179606090;179606089 |
N2AB | 3640 | 11143;11144;11145 | chr2:178741364;178741363;178741362 | chr2:179606091;179606090;179606089 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3594 | 11005;11006;11007 | chr2:178741364;178741363;178741362 | chr2:179606091;179606090;179606089 |
Novex-1 | 3719 | 11380;11381;11382 | chr2:178741364;178741363;178741362 | chr2:179606091;179606090;179606089 |
Novex-2 | 3786 | 11581;11582;11583 | chr2:178741364;178741363;178741362 | chr2:179606091;179606090;179606089 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.046 | N | 0.309 | 0.354 | 0.299086750705 | gnomAD-4.0.0 | 3.18214E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71592E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9805 | likely_pathogenic | 0.9661 | pathogenic | -2.018 | Highly Destabilizing | 0.953 | D | 0.799 | deleterious | None | None | None | None | N |
F/C | 0.9267 | likely_pathogenic | 0.8851 | pathogenic | -1.061 | Destabilizing | 0.999 | D | 0.834 | deleterious | D | 0.791206719 | None | None | N |
F/D | 0.9987 | likely_pathogenic | 0.998 | pathogenic | -3.064 | Highly Destabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | N |
F/E | 0.9978 | likely_pathogenic | 0.9966 | pathogenic | -2.83 | Highly Destabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | N |
F/G | 0.993 | likely_pathogenic | 0.9876 | pathogenic | -2.442 | Highly Destabilizing | 0.998 | D | 0.87 | deleterious | None | None | None | None | N |
F/H | 0.9851 | likely_pathogenic | 0.9803 | pathogenic | -2.031 | Highly Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
F/I | 0.7672 | likely_pathogenic | 0.6882 | pathogenic | -0.617 | Destabilizing | 0.885 | D | 0.664 | neutral | D | 0.561306965 | None | None | N |
F/K | 0.9972 | likely_pathogenic | 0.996 | pathogenic | -1.882 | Destabilizing | 0.993 | D | 0.877 | deleterious | None | None | None | None | N |
F/L | 0.9426 | likely_pathogenic | 0.9212 | pathogenic | -0.617 | Destabilizing | 0.046 | N | 0.309 | neutral | N | 0.476099917 | None | None | N |
F/M | 0.8956 | likely_pathogenic | 0.8378 | pathogenic | -0.501 | Destabilizing | 0.986 | D | 0.655 | neutral | None | None | None | None | N |
F/N | 0.9962 | likely_pathogenic | 0.9943 | pathogenic | -2.623 | Highly Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
F/P | 0.9994 | likely_pathogenic | 0.999 | pathogenic | -1.098 | Destabilizing | 0.998 | D | 0.879 | deleterious | None | None | None | None | N |
F/Q | 0.996 | likely_pathogenic | 0.9936 | pathogenic | -2.293 | Highly Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
F/R | 0.9916 | likely_pathogenic | 0.9883 | pathogenic | -2.089 | Highly Destabilizing | 0.993 | D | 0.875 | deleterious | None | None | None | None | N |
F/S | 0.9847 | likely_pathogenic | 0.9725 | pathogenic | -2.882 | Highly Destabilizing | 0.991 | D | 0.839 | deleterious | D | 0.791206719 | None | None | N |
F/T | 0.9843 | likely_pathogenic | 0.9731 | pathogenic | -2.52 | Highly Destabilizing | 0.993 | D | 0.822 | deleterious | None | None | None | None | N |
F/V | 0.8204 | likely_pathogenic | 0.737 | pathogenic | -1.098 | Destabilizing | 0.885 | D | 0.713 | prob.delet. | D | 0.663573005 | None | None | N |
F/W | 0.8599 | likely_pathogenic | 0.8288 | pathogenic | -0.319 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
F/Y | 0.6907 | likely_pathogenic | 0.65 | pathogenic | -0.686 | Destabilizing | 0.969 | D | 0.596 | neutral | D | 0.732856737 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.