Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3958 | 12097;12098;12099 | chr2:178741361;178741360;178741359 | chr2:179606088;179606087;179606086 |
N2AB | 3641 | 11146;11147;11148 | chr2:178741361;178741360;178741359 | chr2:179606088;179606087;179606086 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3595 | 11008;11009;11010 | chr2:178741361;178741360;178741359 | chr2:179606088;179606087;179606086 |
Novex-1 | 3720 | 11383;11384;11385 | chr2:178741361;178741360;178741359 | chr2:179606088;179606087;179606086 |
Novex-2 | 3787 | 11584;11585;11586 | chr2:178741361;178741360;178741359 | chr2:179606088;179606087;179606086 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.001 | N | 0.263 | 0.249 | None | gnomAD-4.0.0 | 6.84175E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99437E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2112 | likely_benign | 0.2171 | benign | -0.736 | Destabilizing | 0.081 | N | 0.427 | neutral | D | 0.552556776 | None | None | I |
E/C | 0.8444 | likely_pathogenic | 0.8539 | pathogenic | -0.32 | Destabilizing | 0.958 | D | 0.575 | neutral | None | None | None | None | I |
E/D | 0.1486 | likely_benign | 0.1797 | benign | -0.741 | Destabilizing | 0.001 | N | 0.231 | neutral | N | 0.514848004 | None | None | I |
E/F | 0.8137 | likely_pathogenic | 0.8283 | pathogenic | -0.015 | Destabilizing | 0.497 | N | 0.57 | neutral | None | None | None | None | I |
E/G | 0.2181 | likely_benign | 0.2247 | benign | -1.091 | Destabilizing | 0.175 | N | 0.526 | neutral | D | 0.667038756 | None | None | I |
E/H | 0.4393 | ambiguous | 0.4554 | ambiguous | -0.123 | Destabilizing | 0.002 | N | 0.356 | neutral | None | None | None | None | I |
E/I | 0.5072 | ambiguous | 0.5261 | ambiguous | 0.228 | Stabilizing | 0.331 | N | 0.609 | neutral | None | None | None | None | I |
E/K | 0.1623 | likely_benign | 0.1689 | benign | -0.047 | Destabilizing | 0.001 | N | 0.263 | neutral | N | 0.51291992 | None | None | I |
E/L | 0.5435 | ambiguous | 0.5609 | ambiguous | 0.228 | Stabilizing | 0.001 | N | 0.485 | neutral | None | None | None | None | I |
E/M | 0.6016 | likely_pathogenic | 0.6211 | pathogenic | 0.513 | Stabilizing | 0.497 | N | 0.571 | neutral | None | None | None | None | I |
E/N | 0.2723 | likely_benign | 0.3154 | benign | -0.722 | Destabilizing | 0.001 | N | 0.385 | neutral | None | None | None | None | I |
E/P | 0.6875 | likely_pathogenic | 0.714 | pathogenic | -0.072 | Destabilizing | 0.667 | D | 0.572 | neutral | None | None | None | None | I |
E/Q | 0.1489 | likely_benign | 0.1465 | benign | -0.579 | Destabilizing | 0.008 | N | 0.379 | neutral | N | 0.5147779 | None | None | I |
E/R | 0.2577 | likely_benign | 0.2655 | benign | 0.22 | Stabilizing | 0.124 | N | 0.391 | neutral | None | None | None | None | I |
E/S | 0.2172 | likely_benign | 0.2328 | benign | -0.981 | Destabilizing | 0.055 | N | 0.397 | neutral | None | None | None | None | I |
E/T | 0.2551 | likely_benign | 0.2675 | benign | -0.666 | Destabilizing | 0.22 | N | 0.469 | neutral | None | None | None | None | I |
E/V | 0.3259 | likely_benign | 0.3428 | ambiguous | -0.072 | Destabilizing | 0.096 | N | 0.533 | neutral | D | 0.547880284 | None | None | I |
E/W | 0.9032 | likely_pathogenic | 0.9113 | pathogenic | 0.338 | Stabilizing | 0.958 | D | 0.592 | neutral | None | None | None | None | I |
E/Y | 0.6503 | likely_pathogenic | 0.6714 | pathogenic | 0.294 | Stabilizing | 0.497 | N | 0.593 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.