Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3960 | 12103;12104;12105 | chr2:178741355;178741354;178741353 | chr2:179606082;179606081;179606080 |
N2AB | 3643 | 11152;11153;11154 | chr2:178741355;178741354;178741353 | chr2:179606082;179606081;179606080 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3597 | 11014;11015;11016 | chr2:178741355;178741354;178741353 | chr2:179606082;179606081;179606080 |
Novex-1 | 3722 | 11389;11390;11391 | chr2:178741355;178741354;178741353 | chr2:179606082;179606081;179606080 |
Novex-2 | 3789 | 11590;11591;11592 | chr2:178741355;178741354;178741353 | chr2:179606082;179606081;179606080 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs1487929859 | -0.808 | 0.033 | N | 0.479 | 0.085 | None | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
T/P | rs1487929859 | -0.808 | 0.033 | N | 0.479 | 0.085 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/P | rs1487929859 | -0.808 | 0.033 | N | 0.479 | 0.085 | None | gnomAD-4.0.0 | 2.56189E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39273E-06 | 0 | 2.84398E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0808 | likely_benign | 0.0779 | benign | -1.213 | Destabilizing | None | N | 0.121 | neutral | N | 0.449077292 | None | None | I |
T/C | 0.3635 | ambiguous | 0.3457 | ambiguous | -0.741 | Destabilizing | 0.245 | N | 0.45 | neutral | None | None | None | None | I |
T/D | 0.3055 | likely_benign | 0.2912 | benign | -0.16 | Destabilizing | 0.009 | N | 0.411 | neutral | None | None | None | None | I |
T/E | 0.1711 | likely_benign | 0.1656 | benign | -0.047 | Destabilizing | 0.009 | N | 0.397 | neutral | None | None | None | None | I |
T/F | 0.2156 | likely_benign | 0.2051 | benign | -1.043 | Destabilizing | 0.022 | N | 0.536 | neutral | None | None | None | None | I |
T/G | 0.2912 | likely_benign | 0.2679 | benign | -1.556 | Destabilizing | 0.009 | N | 0.457 | neutral | None | None | None | None | I |
T/H | 0.2006 | likely_benign | 0.1995 | benign | -1.57 | Destabilizing | 0.245 | N | 0.514 | neutral | None | None | None | None | I |
T/I | 0.1204 | likely_benign | 0.115 | benign | -0.35 | Destabilizing | None | N | 0.173 | neutral | N | 0.44751765 | None | None | I |
T/K | 0.1195 | likely_benign | 0.1172 | benign | -0.368 | Destabilizing | None | N | 0.171 | neutral | N | 0.41996323 | None | None | I |
T/L | 0.0831 | likely_benign | 0.0851 | benign | -0.35 | Destabilizing | None | N | 0.173 | neutral | None | None | None | None | I |
T/M | 0.0754 | likely_benign | 0.0757 | benign | -0.254 | Destabilizing | 0.001 | N | 0.335 | neutral | None | None | None | None | I |
T/N | 0.1298 | likely_benign | 0.1264 | benign | -0.625 | Destabilizing | 0.009 | N | 0.339 | neutral | None | None | None | None | I |
T/P | 0.3797 | ambiguous | 0.3634 | ambiguous | -0.607 | Destabilizing | 0.033 | N | 0.479 | neutral | N | 0.503968825 | None | None | I |
T/Q | 0.1528 | likely_benign | 0.1584 | benign | -0.616 | Destabilizing | None | N | 0.163 | neutral | None | None | None | None | I |
T/R | 0.0847 | likely_benign | 0.0855 | benign | -0.37 | Destabilizing | None | N | 0.194 | neutral | N | 0.445633024 | None | None | I |
T/S | 0.1218 | likely_benign | 0.1178 | benign | -1.076 | Destabilizing | None | N | 0.155 | neutral | N | 0.445633024 | None | None | I |
T/V | 0.1077 | likely_benign | 0.105 | benign | -0.607 | Destabilizing | None | N | 0.171 | neutral | None | None | None | None | I |
T/W | 0.4778 | ambiguous | 0.4549 | ambiguous | -0.936 | Destabilizing | 0.788 | D | 0.503 | neutral | None | None | None | None | I |
T/Y | 0.248 | likely_benign | 0.2379 | benign | -0.663 | Destabilizing | 0.085 | N | 0.553 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.