Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3961 | 12106;12107;12108 | chr2:178741352;178741351;178741350 | chr2:179606079;179606078;179606077 |
N2AB | 3644 | 11155;11156;11157 | chr2:178741352;178741351;178741350 | chr2:179606079;179606078;179606077 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3598 | 11017;11018;11019 | chr2:178741352;178741351;178741350 | chr2:179606079;179606078;179606077 |
Novex-1 | 3723 | 11392;11393;11394 | chr2:178741352;178741351;178741350 | chr2:179606079;179606078;179606077 |
Novex-2 | 3790 | 11593;11594;11595 | chr2:178741352;178741351;178741350 | chr2:179606079;179606078;179606077 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1017307763 | None | 0.982 | D | 0.746 | 0.428 | None | gnomAD-4.0.0 | 2.05252E-06 | None | None | None | None | I | None | 5.97514E-05 | 0 | None | 0 | 2.5194E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3493 | ambiguous | 0.2997 | benign | -2.117 | Highly Destabilizing | 0.17 | N | 0.348 | neutral | D | 0.52935795 | None | None | I |
V/C | 0.9167 | likely_pathogenic | 0.9057 | pathogenic | -1.544 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
V/D | 0.983 | likely_pathogenic | 0.9731 | pathogenic | -2.665 | Highly Destabilizing | 0.993 | D | 0.847 | deleterious | None | None | None | None | I |
V/E | 0.9509 | likely_pathogenic | 0.9279 | pathogenic | -2.406 | Highly Destabilizing | 0.991 | D | 0.821 | deleterious | D | 0.760087314 | None | None | I |
V/F | 0.6015 | likely_pathogenic | 0.5534 | ambiguous | -1.144 | Destabilizing | 0.986 | D | 0.797 | deleterious | None | None | None | None | I |
V/G | 0.768 | likely_pathogenic | 0.6912 | pathogenic | -2.695 | Highly Destabilizing | 0.964 | D | 0.805 | deleterious | D | 0.700686014 | None | None | I |
V/H | 0.9845 | likely_pathogenic | 0.9781 | pathogenic | -2.436 | Highly Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | I |
V/I | 0.1059 | likely_benign | 0.1071 | benign | -0.48 | Destabilizing | 0.06 | N | 0.264 | neutral | None | None | None | None | I |
V/K | 0.9711 | likely_pathogenic | 0.9578 | pathogenic | -1.688 | Destabilizing | 0.986 | D | 0.821 | deleterious | None | None | None | None | I |
V/L | 0.464 | ambiguous | 0.4131 | ambiguous | -0.48 | Destabilizing | 0.76 | D | 0.614 | neutral | D | 0.624881722 | None | None | I |
V/M | 0.3783 | ambiguous | 0.3381 | benign | -0.577 | Destabilizing | 0.982 | D | 0.746 | deleterious | D | 0.760791673 | None | None | I |
V/N | 0.9547 | likely_pathogenic | 0.9355 | pathogenic | -2.091 | Highly Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | I |
V/P | 0.9697 | likely_pathogenic | 0.9635 | pathogenic | -1.001 | Destabilizing | 0.993 | D | 0.819 | deleterious | None | None | None | None | I |
V/Q | 0.9573 | likely_pathogenic | 0.9397 | pathogenic | -1.863 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | I |
V/R | 0.9481 | likely_pathogenic | 0.9275 | pathogenic | -1.62 | Destabilizing | 0.993 | D | 0.835 | deleterious | None | None | None | None | I |
V/S | 0.7566 | likely_pathogenic | 0.6976 | pathogenic | -2.73 | Highly Destabilizing | 0.973 | D | 0.791 | deleterious | None | None | None | None | I |
V/T | 0.5234 | ambiguous | 0.469 | ambiguous | -2.321 | Highly Destabilizing | 0.953 | D | 0.681 | prob.neutral | None | None | None | None | I |
V/W | 0.9881 | likely_pathogenic | 0.9837 | pathogenic | -1.691 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | I |
V/Y | 0.9557 | likely_pathogenic | 0.9419 | pathogenic | -1.307 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.