Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3964 | 12115;12116;12117 | chr2:178741343;178741342;178741341 | chr2:179606070;179606069;179606068 |
N2AB | 3647 | 11164;11165;11166 | chr2:178741343;178741342;178741341 | chr2:179606070;179606069;179606068 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3601 | 11026;11027;11028 | chr2:178741343;178741342;178741341 | chr2:179606070;179606069;179606068 |
Novex-1 | 3726 | 11401;11402;11403 | chr2:178741343;178741342;178741341 | chr2:179606070;179606069;179606068 |
Novex-2 | 3793 | 11602;11603;11604 | chr2:178741343;178741342;178741341 | chr2:179606070;179606069;179606068 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1410220479 | -0.021 | None | N | 0.175 | 0.084 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/D | rs1410220479 | -0.021 | None | N | 0.175 | 0.084 | None | gnomAD-4.0.0 | 2.73669E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59775E-06 | 0 | 0 |
E/Q | None | None | 0.175 | N | 0.438 | 0.1 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/V | rs756497264 | 0.431 | 0.001 | N | 0.402 | 0.178 | None | gnomAD-4.0.0 | 1.59106E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2194 | likely_benign | 0.2081 | benign | -0.066 | Destabilizing | 0.042 | N | 0.453 | neutral | N | 0.499194585 | None | None | I |
E/C | 0.8091 | likely_pathogenic | 0.8015 | pathogenic | -0.153 | Destabilizing | 0.883 | D | 0.497 | neutral | None | None | None | None | I |
E/D | 0.1559 | likely_benign | 0.1516 | benign | -0.236 | Destabilizing | None | N | 0.175 | neutral | N | 0.4654025 | None | None | I |
E/F | 0.6125 | likely_pathogenic | 0.5948 | pathogenic | -0.086 | Destabilizing | 0.497 | N | 0.519 | neutral | None | None | None | None | I |
E/G | 0.2704 | likely_benign | 0.2302 | benign | -0.195 | Destabilizing | 0.042 | N | 0.566 | neutral | D | 0.569470566 | None | None | I |
E/H | 0.4246 | ambiguous | 0.4284 | ambiguous | 0.485 | Stabilizing | 0.667 | D | 0.431 | neutral | None | None | None | None | I |
E/I | 0.2947 | likely_benign | 0.2935 | benign | 0.217 | Stabilizing | 0.046 | N | 0.57 | neutral | None | None | None | None | I |
E/K | 0.1395 | likely_benign | 0.1228 | benign | 0.41 | Stabilizing | 0.001 | N | 0.258 | neutral | N | 0.497472054 | None | None | I |
E/L | 0.4012 | ambiguous | 0.3927 | ambiguous | 0.217 | Stabilizing | 0.124 | N | 0.575 | neutral | None | None | None | None | I |
E/M | 0.3919 | ambiguous | 0.3839 | ambiguous | 0.026 | Stabilizing | 0.667 | D | 0.518 | neutral | None | None | None | None | I |
E/N | 0.2294 | likely_benign | 0.2296 | benign | 0.189 | Stabilizing | 0.001 | N | 0.259 | neutral | None | None | None | None | I |
E/P | 0.9258 | likely_pathogenic | 0.8836 | pathogenic | 0.141 | Stabilizing | 0.364 | N | 0.501 | neutral | None | None | None | None | I |
E/Q | 0.141 | likely_benign | 0.1443 | benign | 0.198 | Stabilizing | 0.175 | N | 0.438 | neutral | N | 0.509162563 | None | None | I |
E/R | 0.2687 | likely_benign | 0.245 | benign | 0.656 | Stabilizing | 0.124 | N | 0.431 | neutral | None | None | None | None | I |
E/S | 0.2103 | likely_benign | 0.2033 | benign | 0.026 | Stabilizing | 0.001 | N | 0.239 | neutral | None | None | None | None | I |
E/T | 0.245 | likely_benign | 0.236 | benign | 0.135 | Stabilizing | 0.004 | N | 0.287 | neutral | None | None | None | None | I |
E/V | 0.2011 | likely_benign | 0.1965 | benign | 0.141 | Stabilizing | 0.001 | N | 0.402 | neutral | N | 0.503770688 | None | None | I |
E/W | 0.8708 | likely_pathogenic | 0.8518 | pathogenic | -0.025 | Destabilizing | 0.958 | D | 0.523 | neutral | None | None | None | None | I |
E/Y | 0.4965 | ambiguous | 0.4789 | ambiguous | 0.142 | Stabilizing | 0.667 | D | 0.521 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.