Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3966 | 12121;12122;12123 | chr2:178741337;178741336;178741335 | chr2:179606064;179606063;179606062 |
N2AB | 3649 | 11170;11171;11172 | chr2:178741337;178741336;178741335 | chr2:179606064;179606063;179606062 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3603 | 11032;11033;11034 | chr2:178741337;178741336;178741335 | chr2:179606064;179606063;179606062 |
Novex-1 | 3728 | 11407;11408;11409 | chr2:178741337;178741336;178741335 | chr2:179606064;179606063;179606062 |
Novex-2 | 3795 | 11608;11609;11610 | chr2:178741337;178741336;178741335 | chr2:179606064;179606063;179606062 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.055 | N | 0.499 | 0.053 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4062 | ambiguous | 0.4149 | ambiguous | -0.687 | Destabilizing | 0.001 | N | 0.153 | neutral | None | None | None | None | I |
A/D | 0.1914 | likely_benign | 0.195 | benign | -0.573 | Destabilizing | 0.055 | N | 0.499 | neutral | N | 0.507544067 | None | None | I |
A/E | 0.1541 | likely_benign | 0.1662 | benign | -0.733 | Destabilizing | 0.038 | N | 0.411 | neutral | None | None | None | None | I |
A/F | 0.2091 | likely_benign | 0.2084 | benign | -0.954 | Destabilizing | None | N | 0.317 | neutral | None | None | None | None | I |
A/G | 0.1569 | likely_benign | 0.1613 | benign | -0.36 | Destabilizing | None | N | 0.092 | neutral | D | 0.616710905 | None | None | I |
A/H | 0.3402 | ambiguous | 0.3568 | ambiguous | -0.445 | Destabilizing | 0.628 | D | 0.505 | neutral | None | None | None | None | I |
A/I | 0.1318 | likely_benign | 0.1456 | benign | -0.368 | Destabilizing | None | N | 0.168 | neutral | None | None | None | None | I |
A/K | 0.2316 | likely_benign | 0.2572 | benign | -0.686 | Destabilizing | None | N | 0.215 | neutral | None | None | None | None | I |
A/L | 0.1061 | likely_benign | 0.1192 | benign | -0.368 | Destabilizing | 0.002 | N | 0.301 | neutral | None | None | None | None | I |
A/M | 0.1465 | likely_benign | 0.1601 | benign | -0.352 | Destabilizing | 0.214 | N | 0.435 | neutral | None | None | None | None | I |
A/N | 0.1814 | likely_benign | 0.1964 | benign | -0.301 | Destabilizing | 0.072 | N | 0.525 | neutral | None | None | None | None | I |
A/P | 0.1147 | likely_benign | 0.1251 | benign | -0.315 | Destabilizing | None | N | 0.216 | neutral | N | 0.472289055 | None | None | I |
A/Q | 0.2123 | likely_benign | 0.2408 | benign | -0.605 | Destabilizing | 0.214 | N | 0.461 | neutral | None | None | None | None | I |
A/R | 0.2193 | likely_benign | 0.2353 | benign | -0.199 | Destabilizing | 0.038 | N | 0.471 | neutral | None | None | None | None | I |
A/S | 0.0874 | likely_benign | 0.0917 | benign | -0.481 | Destabilizing | 0.012 | N | 0.229 | neutral | N | 0.508860585 | None | None | I |
A/T | 0.0707 | likely_benign | 0.074 | benign | -0.566 | Destabilizing | None | N | 0.093 | neutral | N | 0.483018176 | None | None | I |
A/V | 0.0859 | likely_benign | 0.0898 | benign | -0.315 | Destabilizing | None | N | 0.082 | neutral | N | 0.49887892 | None | None | I |
A/W | 0.6262 | likely_pathogenic | 0.6212 | pathogenic | -1.098 | Destabilizing | 0.864 | D | 0.504 | neutral | None | None | None | None | I |
A/Y | 0.3319 | likely_benign | 0.3294 | benign | -0.75 | Destabilizing | 0.12 | N | 0.519 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.