Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3977 | 12154;12155;12156 | chr2:178741304;178741303;178741302 | chr2:179606031;179606030;179606029 |
N2AB | 3660 | 11203;11204;11205 | chr2:178741304;178741303;178741302 | chr2:179606031;179606030;179606029 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3614 | 11065;11066;11067 | chr2:178741304;178741303;178741302 | chr2:179606031;179606030;179606029 |
Novex-1 | 3739 | 11440;11441;11442 | chr2:178741304;178741303;178741302 | chr2:179606031;179606030;179606029 |
Novex-2 | 3806 | 11641;11642;11643 | chr2:178741304;178741303;178741302 | chr2:179606031;179606030;179606029 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.001 | N | 0.153 | 0.102 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2029 | likely_benign | 0.1896 | benign | -0.361 | Destabilizing | 0.055 | N | 0.3 | neutral | None | None | None | None | N |
Q/C | 0.5862 | likely_pathogenic | 0.567 | pathogenic | 0.039 | Stabilizing | 0.958 | D | 0.275 | neutral | None | None | None | None | N |
Q/D | 0.4956 | ambiguous | 0.4264 | ambiguous | 0.162 | Stabilizing | 0.055 | N | 0.242 | neutral | None | None | None | None | N |
Q/E | 0.0979 | likely_benign | 0.084 | benign | 0.195 | Stabilizing | None | N | 0.151 | neutral | N | 0.439093762 | None | None | N |
Q/F | 0.6543 | likely_pathogenic | 0.6143 | pathogenic | -0.304 | Destabilizing | 0.859 | D | 0.293 | neutral | None | None | None | None | N |
Q/G | 0.3683 | ambiguous | 0.3288 | benign | -0.62 | Destabilizing | 0.104 | N | 0.349 | neutral | None | None | None | None | N |
Q/H | 0.2594 | likely_benign | 0.2348 | benign | -0.276 | Destabilizing | 0.602 | D | 0.299 | neutral | N | 0.513488721 | None | None | N |
Q/I | 0.2926 | likely_benign | 0.2699 | benign | 0.257 | Stabilizing | 0.667 | D | 0.32 | neutral | None | None | None | None | N |
Q/K | 0.0903 | likely_benign | 0.0946 | benign | -0.031 | Destabilizing | None | N | 0.143 | neutral | N | 0.496734259 | None | None | N |
Q/L | 0.1163 | likely_benign | 0.1106 | benign | 0.257 | Stabilizing | 0.175 | N | 0.349 | neutral | N | 0.496613234 | None | None | N |
Q/M | 0.305 | likely_benign | 0.2906 | benign | 0.331 | Stabilizing | 0.859 | D | 0.311 | neutral | None | None | None | None | N |
Q/N | 0.3472 | ambiguous | 0.3204 | benign | -0.475 | Destabilizing | 0.22 | N | 0.213 | neutral | None | None | None | None | N |
Q/P | 0.0867 | likely_benign | 0.0842 | benign | 0.081 | Stabilizing | None | N | 0.149 | neutral | N | 0.442373759 | None | None | N |
Q/R | 0.1145 | likely_benign | 0.1099 | benign | 0.136 | Stabilizing | 0.001 | N | 0.153 | neutral | N | 0.501731976 | None | None | N |
Q/S | 0.287 | likely_benign | 0.263 | benign | -0.538 | Destabilizing | 0.055 | N | 0.256 | neutral | None | None | None | None | N |
Q/T | 0.213 | likely_benign | 0.1964 | benign | -0.329 | Destabilizing | 0.22 | N | 0.315 | neutral | None | None | None | None | N |
Q/V | 0.2248 | likely_benign | 0.204 | benign | 0.081 | Stabilizing | 0.22 | N | 0.34 | neutral | None | None | None | None | N |
Q/W | 0.5584 | ambiguous | 0.5068 | ambiguous | -0.242 | Destabilizing | 0.958 | D | 0.293 | neutral | None | None | None | None | N |
Q/Y | 0.4643 | ambiguous | 0.4291 | ambiguous | -0.007 | Destabilizing | 0.859 | D | 0.302 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.