Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC397812157;12158;12159 chr2:178741301;178741300;178741299chr2:179606028;179606027;179606026
N2AB366111206;11207;11208 chr2:178741301;178741300;178741299chr2:179606028;179606027;179606026
N2ANoneNone chr2:Nonechr2:None
N2B361511068;11069;11070 chr2:178741301;178741300;178741299chr2:179606028;179606027;179606026
Novex-1374011443;11444;11445 chr2:178741301;178741300;178741299chr2:179606028;179606027;179606026
Novex-2380711644;11645;11646 chr2:178741301;178741300;178741299chr2:179606028;179606027;179606026
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-28
  • Domain position: 41
  • Structural Position: 58
  • Q(SASA): 0.1816
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1472692011 -1.429 0.968 D 0.609 0.534 None gnomAD-2.1.1 4.02E-06 None None None None I None 0 2.9E-05 None 0 0 None 0 None 0 0 0
L/F rs1472692011 -1.429 0.968 D 0.609 0.534 None gnomAD-4.0.0 1.59108E-06 None None None None I None 0 2.28634E-05 None 0 0 None 0 0 0 0 0
L/P None None 0.995 D 0.772 0.725 None gnomAD-4.0.0 8.40225E-06 None None None None I None 0 0 None 0 0 None 0 0 9.18751E-06 0 0
L/R None None 0.995 D 0.725 0.715 None gnomAD-4.0.0 2.40064E-06 None None None None I None 0 0 None 0 0 None 0 0 2.625E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.7921 likely_pathogenic 0.7655 pathogenic -2.164 Highly Destabilizing 0.919 D 0.591 neutral None None None None I
L/C 0.8259 likely_pathogenic 0.8127 pathogenic -1.376 Destabilizing 0.999 D 0.679 prob.neutral None None None None I
L/D 0.9823 likely_pathogenic 0.9806 pathogenic -2.68 Highly Destabilizing 0.996 D 0.775 deleterious None None None None I
L/E 0.9119 likely_pathogenic 0.8964 pathogenic -2.413 Highly Destabilizing 0.996 D 0.753 deleterious None None None None I
L/F 0.3784 ambiguous 0.3682 ambiguous -1.42 Destabilizing 0.968 D 0.609 neutral D 0.607983544 None None I
L/G 0.9429 likely_pathogenic 0.9382 pathogenic -2.674 Highly Destabilizing 0.996 D 0.744 deleterious None None None None I
L/H 0.7764 likely_pathogenic 0.7599 pathogenic -2.213 Highly Destabilizing 0.999 D 0.758 deleterious D 0.752706044 None None I
L/I 0.1182 likely_benign 0.1118 benign -0.66 Destabilizing 0.011 N 0.209 neutral N 0.469810259 None None I
L/K 0.844 likely_pathogenic 0.8298 pathogenic -1.629 Destabilizing 0.988 D 0.711 prob.delet. None None None None I
L/M 0.288 likely_benign 0.2682 benign -0.67 Destabilizing 0.976 D 0.647 neutral None None None None I
L/N 0.9211 likely_pathogenic 0.9169 pathogenic -2.164 Highly Destabilizing 0.996 D 0.775 deleterious None None None None I
L/P 0.8887 likely_pathogenic 0.8958 pathogenic -1.149 Destabilizing 0.995 D 0.772 deleterious D 0.65436035 None None I
L/Q 0.7393 likely_pathogenic 0.7029 pathogenic -1.916 Destabilizing 0.996 D 0.721 prob.delet. None None None None I
L/R 0.7157 likely_pathogenic 0.694 pathogenic -1.649 Destabilizing 0.995 D 0.725 prob.delet. D 0.676680096 None None I
L/S 0.9164 likely_pathogenic 0.909 pathogenic -2.736 Highly Destabilizing 0.988 D 0.679 prob.neutral None None None None I
L/T 0.8237 likely_pathogenic 0.7965 pathogenic -2.314 Highly Destabilizing 0.919 D 0.636 neutral None None None None I
L/V 0.176 likely_benign 0.1564 benign -1.149 Destabilizing 0.103 N 0.261 neutral N 0.516502007 None None I
L/W 0.6972 likely_pathogenic 0.6824 pathogenic -1.743 Destabilizing 0.999 D 0.712 prob.delet. None None None None I
L/Y 0.7382 likely_pathogenic 0.7438 pathogenic -1.427 Destabilizing 0.996 D 0.721 prob.delet. None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.