Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3979 | 12160;12161;12162 | chr2:178741298;178741297;178741296 | chr2:179606025;179606024;179606023 |
N2AB | 3662 | 11209;11210;11211 | chr2:178741298;178741297;178741296 | chr2:179606025;179606024;179606023 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3616 | 11071;11072;11073 | chr2:178741298;178741297;178741296 | chr2:179606025;179606024;179606023 |
Novex-1 | 3741 | 11446;11447;11448 | chr2:178741298;178741297;178741296 | chr2:179606025;179606024;179606023 |
Novex-2 | 3808 | 11647;11648;11649 | chr2:178741298;178741297;178741296 | chr2:179606025;179606024;179606023 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | None | None | 0.025 | N | 0.427 | 0.176 | None | gnomAD-4.0.0 | 8.40227E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18753E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3193 | likely_benign | 0.2469 | benign | -0.718 | Destabilizing | 0.006 | N | 0.183 | neutral | None | None | None | None | I |
C/D | 0.3266 | likely_benign | 0.2465 | benign | 0.592 | Stabilizing | 0.064 | N | 0.35 | neutral | None | None | None | None | I |
C/E | 0.4798 | ambiguous | 0.3742 | ambiguous | 0.595 | Stabilizing | 0.015 | N | 0.339 | neutral | None | None | None | None | I |
C/F | 0.113 | likely_benign | 0.0984 | benign | -0.589 | Destabilizing | None | N | 0.152 | neutral | N | 0.420738122 | None | None | I |
C/G | 0.1357 | likely_benign | 0.1113 | benign | -0.888 | Destabilizing | 0.011 | N | 0.341 | neutral | N | 0.425863566 | None | None | I |
C/H | 0.1961 | likely_benign | 0.1626 | benign | -0.756 | Destabilizing | 0.367 | N | 0.472 | neutral | None | None | None | None | I |
C/I | 0.3877 | ambiguous | 0.2998 | benign | -0.346 | Destabilizing | 0.033 | N | 0.371 | neutral | None | None | None | None | I |
C/K | 0.4407 | ambiguous | 0.3576 | ambiguous | 0.064 | Stabilizing | 0.001 | N | 0.181 | neutral | None | None | None | None | I |
C/L | 0.3195 | likely_benign | 0.2596 | benign | -0.346 | Destabilizing | 0.015 | N | 0.244 | neutral | None | None | None | None | I |
C/M | 0.5696 | likely_pathogenic | 0.4629 | ambiguous | 0.068 | Stabilizing | 0.54 | D | 0.347 | neutral | None | None | None | None | I |
C/N | 0.2483 | likely_benign | 0.1963 | benign | 0.221 | Stabilizing | 0.033 | N | 0.403 | neutral | None | None | None | None | I |
C/P | 0.5514 | ambiguous | 0.3969 | ambiguous | -0.445 | Destabilizing | 0.251 | N | 0.474 | neutral | None | None | None | None | I |
C/Q | 0.298 | likely_benign | 0.2336 | benign | 0.186 | Stabilizing | 0.001 | N | 0.173 | neutral | None | None | None | None | I |
C/R | 0.1631 | likely_benign | 0.1388 | benign | 0.309 | Stabilizing | 0.025 | N | 0.427 | neutral | N | 0.407575262 | None | None | I |
C/S | 0.1779 | likely_benign | 0.1456 | benign | -0.253 | Destabilizing | None | N | 0.156 | neutral | N | 0.356561958 | None | None | I |
C/T | 0.3478 | ambiguous | 0.2714 | benign | -0.103 | Destabilizing | 0.015 | N | 0.308 | neutral | None | None | None | None | I |
C/V | 0.3629 | ambiguous | 0.2827 | benign | -0.445 | Destabilizing | 0.029 | N | 0.309 | neutral | None | None | None | None | I |
C/W | 0.2832 | likely_benign | 0.2359 | benign | -0.574 | Destabilizing | 0.47 | N | 0.39 | neutral | N | 0.484653926 | None | None | I |
C/Y | 0.1135 | likely_benign | 0.1029 | benign | -0.443 | Destabilizing | None | N | 0.155 | neutral | N | 0.436969089 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.