Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3982 | 12169;12170;12171 | chr2:178741289;178741288;178741287 | chr2:179606016;179606015;179606014 |
N2AB | 3665 | 11218;11219;11220 | chr2:178741289;178741288;178741287 | chr2:179606016;179606015;179606014 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3619 | 11080;11081;11082 | chr2:178741289;178741288;178741287 | chr2:179606016;179606015;179606014 |
Novex-1 | 3744 | 11455;11456;11457 | chr2:178741289;178741288;178741287 | chr2:179606016;179606015;179606014 |
Novex-2 | 3811 | 11656;11657;11658 | chr2:178741289;178741288;178741287 | chr2:179606016;179606015;179606014 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1032555583 | None | 0.001 | N | 0.148 | 0.112 | None | gnomAD-4.0.0 | 4.10507E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.3966E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2106 | likely_benign | 0.1947 | benign | -0.446 | Destabilizing | None | N | 0.091 | neutral | N | 0.436690744 | None | None | I |
V/C | 0.7608 | likely_pathogenic | 0.7201 | pathogenic | -0.827 | Destabilizing | 0.667 | D | 0.177 | neutral | None | None | None | None | I |
V/D | 0.3381 | likely_benign | 0.3184 | benign | -0.116 | Destabilizing | 0.042 | N | 0.227 | neutral | N | 0.423114327 | None | None | I |
V/E | 0.3376 | likely_benign | 0.3121 | benign | -0.205 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | I |
V/F | 0.2061 | likely_benign | 0.1809 | benign | -0.624 | Destabilizing | 0.427 | N | 0.249 | neutral | N | 0.446379075 | None | None | I |
V/G | 0.267 | likely_benign | 0.2428 | benign | -0.556 | Destabilizing | 0.042 | N | 0.209 | neutral | N | 0.414071996 | None | None | I |
V/H | 0.6424 | likely_pathogenic | 0.6019 | pathogenic | 0.006 | Stabilizing | 0.667 | D | 0.177 | neutral | None | None | None | None | I |
V/I | 0.0756 | likely_benign | 0.0715 | benign | -0.293 | Destabilizing | 0.001 | N | 0.148 | neutral | N | 0.447356772 | None | None | I |
V/K | 0.4114 | ambiguous | 0.4094 | ambiguous | -0.39 | Destabilizing | 0.055 | N | 0.186 | neutral | None | None | None | None | I |
V/L | 0.2533 | likely_benign | 0.212 | benign | -0.293 | Destabilizing | 0.007 | N | 0.145 | neutral | N | 0.447128882 | None | None | I |
V/M | 0.1805 | likely_benign | 0.16 | benign | -0.576 | Destabilizing | 0.497 | N | 0.161 | neutral | None | None | None | None | I |
V/N | 0.2973 | likely_benign | 0.2741 | benign | -0.263 | Destabilizing | 0.22 | N | 0.246 | neutral | None | None | None | None | I |
V/P | 0.4059 | ambiguous | 0.3758 | ambiguous | -0.313 | Destabilizing | 0.364 | N | 0.261 | neutral | None | None | None | None | I |
V/Q | 0.427 | ambiguous | 0.405 | ambiguous | -0.422 | Destabilizing | 0.004 | N | 0.182 | neutral | None | None | None | None | I |
V/R | 0.3235 | likely_benign | 0.332 | benign | 0.057 | Stabilizing | None | N | 0.139 | neutral | None | None | None | None | I |
V/S | 0.2458 | likely_benign | 0.2308 | benign | -0.647 | Destabilizing | 0.055 | N | 0.175 | neutral | None | None | None | None | I |
V/T | 0.2358 | likely_benign | 0.2212 | benign | -0.629 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | I |
V/W | 0.8447 | likely_pathogenic | 0.8042 | pathogenic | -0.684 | Destabilizing | 0.958 | D | 0.177 | neutral | None | None | None | None | I |
V/Y | 0.5825 | likely_pathogenic | 0.5551 | ambiguous | -0.415 | Destabilizing | 0.667 | D | 0.245 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.