Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3991 | 12196;12197;12198 | chr2:178741262;178741261;178741260 | chr2:179605989;179605988;179605987 |
N2AB | 3674 | 11245;11246;11247 | chr2:178741262;178741261;178741260 | chr2:179605989;179605988;179605987 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3628 | 11107;11108;11109 | chr2:178741262;178741261;178741260 | chr2:179605989;179605988;179605987 |
Novex-1 | 3753 | 11482;11483;11484 | chr2:178741262;178741261;178741260 | chr2:179605989;179605988;179605987 |
Novex-2 | 3820 | 11683;11684;11685 | chr2:178741262;178741261;178741260 | chr2:179605989;179605988;179605987 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1248393743 | None | 0.005 | N | 0.213 | 0.166 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs1248393743 | None | 0.005 | N | 0.213 | 0.166 | None | gnomAD-4.0.0 | 3.09863E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.23794E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1482 | likely_benign | 0.1318 | benign | -0.253 | Destabilizing | 0.016 | N | 0.405 | neutral | None | None | None | None | N |
N/C | 0.2171 | likely_benign | 0.2062 | benign | 0.498 | Stabilizing | 0.864 | D | 0.391 | neutral | None | None | None | None | N |
N/D | 0.0484 | likely_benign | 0.0489 | benign | 0.002 | Stabilizing | None | N | 0.162 | neutral | N | 0.363264421 | None | None | N |
N/E | 0.2081 | likely_benign | 0.1828 | benign | -0.055 | Destabilizing | None | N | 0.16 | neutral | None | None | None | None | N |
N/F | 0.4659 | ambiguous | 0.4075 | ambiguous | -0.747 | Destabilizing | 0.628 | D | 0.439 | neutral | None | None | None | None | N |
N/G | 0.1741 | likely_benign | 0.1555 | benign | -0.386 | Destabilizing | 0.014 | N | 0.223 | neutral | None | None | None | None | N |
N/H | 0.1369 | likely_benign | 0.125 | benign | -0.495 | Destabilizing | 0.295 | N | 0.3 | neutral | N | 0.447511746 | None | None | N |
N/I | 0.1927 | likely_benign | 0.1775 | benign | 0.006 | Stabilizing | 0.106 | N | 0.449 | neutral | D | 0.527576333 | None | None | N |
N/K | 0.2325 | likely_benign | 0.2119 | benign | 0.182 | Stabilizing | 0.012 | N | 0.243 | neutral | N | 0.451296477 | None | None | N |
N/L | 0.2145 | likely_benign | 0.2039 | benign | 0.006 | Stabilizing | 0.072 | N | 0.463 | neutral | None | None | None | None | N |
N/M | 0.2944 | likely_benign | 0.284 | benign | 0.43 | Stabilizing | 0.628 | D | 0.413 | neutral | None | None | None | None | N |
N/P | 0.6785 | likely_pathogenic | 0.6424 | pathogenic | -0.056 | Destabilizing | 0.136 | N | 0.448 | neutral | None | None | None | None | N |
N/Q | 0.2692 | likely_benign | 0.2462 | benign | -0.169 | Destabilizing | 0.016 | N | 0.265 | neutral | None | None | None | None | N |
N/R | 0.2774 | likely_benign | 0.2402 | benign | 0.273 | Stabilizing | 0.038 | N | 0.267 | neutral | None | None | None | None | N |
N/S | 0.0737 | likely_benign | 0.0708 | benign | 0.097 | Stabilizing | 0.005 | N | 0.213 | neutral | N | 0.442646312 | None | None | N |
N/T | 0.109 | likely_benign | 0.1037 | benign | 0.161 | Stabilizing | 0.024 | N | 0.255 | neutral | N | 0.447263231 | None | None | N |
N/V | 0.1617 | likely_benign | 0.1459 | benign | -0.056 | Destabilizing | 0.072 | N | 0.463 | neutral | None | None | None | None | N |
N/W | 0.7252 | likely_pathogenic | 0.6862 | pathogenic | -0.792 | Destabilizing | 0.864 | D | 0.409 | neutral | None | None | None | None | N |
N/Y | 0.1564 | likely_benign | 0.1361 | benign | -0.506 | Destabilizing | 0.56 | D | 0.439 | neutral | N | 0.442165428 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.