Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4000 | 12223;12224;12225 | chr2:178741235;178741234;178741233 | chr2:179605962;179605961;179605960 |
N2AB | 3683 | 11272;11273;11274 | chr2:178741235;178741234;178741233 | chr2:179605962;179605961;179605960 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3637 | 11134;11135;11136 | chr2:178741235;178741234;178741233 | chr2:179605962;179605961;179605960 |
Novex-1 | 3762 | 11509;11510;11511 | chr2:178741235;178741234;178741233 | chr2:179605962;179605961;179605960 |
Novex-2 | 3829 | 11710;11711;11712 | chr2:178741235;178741234;178741233 | chr2:179605962;179605961;179605960 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.334 | N | 0.313 | 0.024 | None | gnomAD-4.0.0 | 6.84355E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99431E-07 | 0 | 0 |
D/G | rs938144456 | None | 0.201 | N | 0.289 | 0.107 | None | gnomAD-4.0.0 | 1.59183E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3774 | ambiguous | 0.3952 | ambiguous | -0.342 | Destabilizing | 0.201 | N | 0.319 | neutral | N | 0.452624287 | None | None | I |
D/C | 0.8204 | likely_pathogenic | 0.8387 | pathogenic | -0.079 | Destabilizing | 0.992 | D | 0.408 | neutral | None | None | None | None | I |
D/E | 0.429 | ambiguous | 0.4314 | ambiguous | -0.66 | Destabilizing | 0.334 | N | 0.313 | neutral | N | 0.453760573 | None | None | I |
D/F | 0.7193 | likely_pathogenic | 0.7601 | pathogenic | -0.412 | Destabilizing | 0.972 | D | 0.411 | neutral | None | None | None | None | I |
D/G | 0.5012 | ambiguous | 0.5398 | ambiguous | -0.618 | Destabilizing | 0.201 | N | 0.289 | neutral | N | 0.453658116 | None | None | I |
D/H | 0.4536 | ambiguous | 0.5048 | ambiguous | -0.82 | Destabilizing | 0.81 | D | 0.343 | neutral | N | 0.445061464 | None | None | I |
D/I | 0.6561 | likely_pathogenic | 0.678 | pathogenic | 0.354 | Stabilizing | 0.85 | D | 0.425 | neutral | None | None | None | None | I |
D/K | 0.6056 | likely_pathogenic | 0.6784 | pathogenic | -0.352 | Destabilizing | 0.447 | N | 0.29 | neutral | None | None | None | None | I |
D/L | 0.6465 | likely_pathogenic | 0.6755 | pathogenic | 0.354 | Stabilizing | 0.617 | D | 0.376 | neutral | None | None | None | None | I |
D/M | 0.8544 | likely_pathogenic | 0.8621 | pathogenic | 0.741 | Stabilizing | 0.992 | D | 0.397 | neutral | None | None | None | None | I |
D/N | 0.1583 | likely_benign | 0.1801 | benign | -0.527 | Destabilizing | 0.002 | N | 0.121 | neutral | N | 0.439773629 | None | None | I |
D/P | 0.9617 | likely_pathogenic | 0.9605 | pathogenic | 0.147 | Stabilizing | 0.92 | D | 0.345 | neutral | None | None | None | None | I |
D/Q | 0.6198 | likely_pathogenic | 0.6479 | pathogenic | -0.447 | Destabilizing | 0.85 | D | 0.349 | neutral | None | None | None | None | I |
D/R | 0.5775 | likely_pathogenic | 0.6442 | pathogenic | -0.328 | Destabilizing | 0.85 | D | 0.373 | neutral | None | None | None | None | I |
D/S | 0.2463 | likely_benign | 0.2703 | benign | -0.716 | Destabilizing | 0.026 | N | 0.131 | neutral | None | None | None | None | I |
D/T | 0.547 | ambiguous | 0.5642 | pathogenic | -0.51 | Destabilizing | 0.021 | N | 0.191 | neutral | None | None | None | None | I |
D/V | 0.4831 | ambiguous | 0.4986 | ambiguous | 0.147 | Stabilizing | 0.549 | D | 0.352 | neutral | N | 0.477671441 | None | None | I |
D/W | 0.9533 | likely_pathogenic | 0.957 | pathogenic | -0.401 | Destabilizing | 0.992 | D | 0.551 | neutral | None | None | None | None | I |
D/Y | 0.2635 | likely_benign | 0.3188 | benign | -0.238 | Destabilizing | 0.963 | D | 0.41 | neutral | N | 0.447992376 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.