Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4002 | 12229;12230;12231 | chr2:178741229;178741228;178741227 | chr2:179605956;179605955;179605954 |
N2AB | 3685 | 11278;11279;11280 | chr2:178741229;178741228;178741227 | chr2:179605956;179605955;179605954 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3639 | 11140;11141;11142 | chr2:178741229;178741228;178741227 | chr2:179605956;179605955;179605954 |
Novex-1 | 3764 | 11515;11516;11517 | chr2:178741229;178741228;178741227 | chr2:179605956;179605955;179605954 |
Novex-2 | 3831 | 11716;11717;11718 | chr2:178741229;178741228;178741227 | chr2:179605956;179605955;179605954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.425 | N | 0.269 | 0.176 | None | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3459 | ambiguous | 0.3013 | benign | -0.435 | Destabilizing | 0.329 | N | 0.333 | neutral | None | None | None | None | I |
Q/C | 0.6494 | likely_pathogenic | 0.5814 | pathogenic | 0.194 | Stabilizing | 0.995 | D | 0.333 | neutral | None | None | None | None | I |
Q/D | 0.5619 | ambiguous | 0.4946 | ambiguous | -0.592 | Destabilizing | 0.329 | N | 0.181 | neutral | None | None | None | None | I |
Q/E | 0.1116 | likely_benign | 0.1046 | benign | -0.549 | Destabilizing | 0.425 | N | 0.269 | neutral | N | 0.508139942 | None | None | I |
Q/F | 0.7471 | likely_pathogenic | 0.6719 | pathogenic | -0.306 | Destabilizing | 0.893 | D | 0.356 | neutral | None | None | None | None | I |
Q/G | 0.3093 | likely_benign | 0.2804 | benign | -0.746 | Destabilizing | 0.329 | N | 0.338 | neutral | None | None | None | None | I |
Q/H | 0.3025 | likely_benign | 0.2578 | benign | -0.769 | Destabilizing | 0.927 | D | 0.278 | neutral | D | 0.553336482 | None | None | I |
Q/I | 0.4971 | ambiguous | 0.4298 | ambiguous | 0.334 | Stabilizing | 0.543 | D | 0.375 | neutral | None | None | None | None | I |
Q/K | 0.0849 | likely_benign | 0.0853 | benign | -0.316 | Destabilizing | 0.01 | N | 0.111 | neutral | N | 0.500549486 | None | None | I |
Q/L | 0.1683 | likely_benign | 0.1423 | benign | 0.334 | Stabilizing | 0.27 | N | 0.336 | neutral | N | 0.510704917 | None | None | I |
Q/M | 0.4726 | ambiguous | 0.4088 | ambiguous | 0.853 | Stabilizing | 0.944 | D | 0.278 | neutral | None | None | None | None | I |
Q/N | 0.4118 | ambiguous | 0.37 | ambiguous | -0.728 | Destabilizing | 0.007 | N | 0.113 | neutral | None | None | None | None | I |
Q/P | 0.4476 | ambiguous | 0.4044 | ambiguous | 0.109 | Stabilizing | 0.784 | D | 0.347 | neutral | D | 0.663077372 | None | None | I |
Q/R | 0.1046 | likely_benign | 0.0975 | benign | -0.209 | Destabilizing | 0.27 | N | 0.201 | neutral | N | 0.511272088 | None | None | I |
Q/S | 0.3799 | ambiguous | 0.3363 | benign | -0.746 | Destabilizing | 0.329 | N | 0.257 | neutral | None | None | None | None | I |
Q/T | 0.3362 | likely_benign | 0.2942 | benign | -0.528 | Destabilizing | 0.495 | N | 0.296 | neutral | None | None | None | None | I |
Q/V | 0.3609 | ambiguous | 0.2991 | benign | 0.109 | Stabilizing | 0.007 | N | 0.184 | neutral | None | None | None | None | I |
Q/W | 0.6294 | likely_pathogenic | 0.5632 | ambiguous | -0.241 | Destabilizing | 0.995 | D | 0.349 | neutral | None | None | None | None | I |
Q/Y | 0.5987 | likely_pathogenic | 0.5214 | ambiguous | -0.013 | Destabilizing | 0.944 | D | 0.331 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.