Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4003 | 12232;12233;12234 | chr2:178741226;178741225;178741224 | chr2:179605953;179605952;179605951 |
N2AB | 3686 | 11281;11282;11283 | chr2:178741226;178741225;178741224 | chr2:179605953;179605952;179605951 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3640 | 11143;11144;11145 | chr2:178741226;178741225;178741224 | chr2:179605953;179605952;179605951 |
Novex-1 | 3765 | 11518;11519;11520 | chr2:178741226;178741225;178741224 | chr2:179605953;179605952;179605951 |
Novex-2 | 3832 | 11719;11720;11721 | chr2:178741226;178741225;178741224 | chr2:179605953;179605952;179605951 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | None | N | 0.107 | 0.098 | None | gnomAD-4.0.0 | 1.59205E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85796E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1672 | likely_benign | 0.1317 | benign | -0.066 | Destabilizing | 0.004 | N | 0.205 | neutral | None | None | None | None | I |
R/C | 0.1786 | likely_benign | 0.1531 | benign | -0.233 | Destabilizing | 0.245 | N | 0.217 | neutral | None | None | None | None | I |
R/D | 0.3634 | ambiguous | 0.3007 | benign | -0.094 | Destabilizing | 0.009 | N | 0.198 | neutral | None | None | None | None | I |
R/E | 0.1609 | likely_benign | 0.1319 | benign | -0.035 | Destabilizing | None | N | 0.096 | neutral | None | None | None | None | I |
R/F | 0.3793 | ambiguous | 0.31 | benign | -0.287 | Destabilizing | 0.138 | N | 0.345 | neutral | None | None | None | None | I |
R/G | 0.1063 | likely_benign | 0.0902 | benign | -0.256 | Destabilizing | 0.007 | N | 0.203 | neutral | N | 0.45627133 | None | None | I |
R/H | 0.1245 | likely_benign | 0.1082 | benign | -0.668 | Destabilizing | 0.245 | N | 0.201 | neutral | None | None | None | None | I |
R/I | 0.1172 | likely_benign | 0.1052 | benign | 0.397 | Stabilizing | 0.003 | N | 0.238 | neutral | None | None | None | None | I |
R/K | 0.0738 | likely_benign | 0.0691 | benign | -0.147 | Destabilizing | None | N | 0.107 | neutral | N | 0.424754471 | None | None | I |
R/L | 0.1469 | likely_benign | 0.1227 | benign | 0.397 | Stabilizing | None | N | 0.126 | neutral | None | None | None | None | I |
R/M | 0.1322 | likely_benign | 0.111 | benign | 0.001 | Stabilizing | 0.108 | N | 0.245 | neutral | N | 0.453485314 | None | None | I |
R/N | 0.2967 | likely_benign | 0.24 | benign | 0.09 | Stabilizing | 0.009 | N | 0.19 | neutral | None | None | None | None | I |
R/P | 0.2985 | likely_benign | 0.2225 | benign | 0.263 | Stabilizing | 0.085 | N | 0.372 | neutral | None | None | None | None | I |
R/Q | 0.0902 | likely_benign | 0.0783 | benign | -0.029 | Destabilizing | None | N | 0.102 | neutral | None | None | None | None | I |
R/S | 0.2188 | likely_benign | 0.1688 | benign | -0.286 | Destabilizing | None | N | 0.143 | neutral | N | 0.441498178 | None | None | I |
R/T | 0.1132 | likely_benign | 0.0925 | benign | -0.096 | Destabilizing | 0.007 | N | 0.227 | neutral | N | 0.453246606 | None | None | I |
R/V | 0.1815 | likely_benign | 0.1466 | benign | 0.263 | Stabilizing | None | N | 0.175 | neutral | None | None | None | None | I |
R/W | 0.1408 | likely_benign | 0.1208 | benign | -0.321 | Destabilizing | 0.737 | D | 0.221 | neutral | N | 0.482501325 | None | None | I |
R/Y | 0.283 | likely_benign | 0.2365 | benign | 0.08 | Stabilizing | 0.085 | N | 0.35 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.