Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4004 | 12235;12236;12237 | chr2:178741223;178741222;178741221 | chr2:179605950;179605949;179605948 |
N2AB | 3687 | 11284;11285;11286 | chr2:178741223;178741222;178741221 | chr2:179605950;179605949;179605948 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3641 | 11146;11147;11148 | chr2:178741223;178741222;178741221 | chr2:179605950;179605949;179605948 |
Novex-1 | 3766 | 11521;11522;11523 | chr2:178741223;178741222;178741221 | chr2:179605950;179605949;179605948 |
Novex-2 | 3833 | 11722;11723;11724 | chr2:178741223;178741222;178741221 | chr2:179605950;179605949;179605948 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs376000381 | -0.475 | None | N | 0.153 | 0.06 | None | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | I | None | 3.72393E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs376000381 | -0.475 | None | N | 0.153 | 0.06 | None | gnomAD-3.1.2 | 1.18309E-04 | None | None | None | None | I | None | 4.34405E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs376000381 | -0.475 | None | N | 0.153 | 0.06 | None | gnomAD-4.0.0 | 1.7975E-05 | None | None | None | None | I | None | 3.87121E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs755242569 | 0.662 | 0.001 | N | 0.188 | 0.061 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/K | rs755242569 | 0.662 | 0.001 | N | 0.188 | 0.061 | None | gnomAD-4.0.0 | 1.09501E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4391E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1335 | likely_benign | 0.1163 | benign | -0.289 | Destabilizing | 0.042 | N | 0.342 | neutral | N | 0.444961429 | None | None | I |
E/C | 0.8017 | likely_pathogenic | 0.7378 | pathogenic | -0.037 | Destabilizing | 0.958 | D | 0.302 | neutral | None | None | None | None | I |
E/D | 0.1576 | likely_benign | 0.1269 | benign | -0.274 | Destabilizing | 0.001 | N | 0.178 | neutral | N | 0.449466837 | None | None | I |
E/F | 0.7061 | likely_pathogenic | 0.6308 | pathogenic | -0.236 | Destabilizing | 0.859 | D | 0.306 | neutral | None | None | None | None | I |
E/G | 0.1091 | likely_benign | 0.0988 | benign | -0.453 | Destabilizing | None | N | 0.153 | neutral | N | 0.446828127 | None | None | I |
E/H | 0.4617 | ambiguous | 0.3918 | ambiguous | 0.124 | Stabilizing | 0.497 | N | 0.356 | neutral | None | None | None | None | I |
E/I | 0.3504 | ambiguous | 0.3018 | benign | 0.1 | Stabilizing | 0.667 | D | 0.327 | neutral | None | None | None | None | I |
E/K | 0.0878 | likely_benign | 0.09 | benign | 0.393 | Stabilizing | 0.001 | N | 0.188 | neutral | N | 0.448526661 | None | None | I |
E/L | 0.3741 | ambiguous | 0.3151 | benign | 0.1 | Stabilizing | 0.22 | N | 0.378 | neutral | None | None | None | None | I |
E/M | 0.3938 | ambiguous | 0.3354 | benign | 0.132 | Stabilizing | 0.883 | D | 0.297 | neutral | None | None | None | None | I |
E/N | 0.2359 | likely_benign | 0.1948 | benign | 0.093 | Stabilizing | 0.124 | N | 0.247 | neutral | None | None | None | None | I |
E/P | 0.5103 | ambiguous | 0.4661 | ambiguous | -0.01 | Destabilizing | 0.667 | D | 0.363 | neutral | None | None | None | None | I |
E/Q | 0.1423 | likely_benign | 0.1264 | benign | 0.123 | Stabilizing | 0.001 | N | 0.217 | neutral | N | 0.461344658 | None | None | I |
E/R | 0.1782 | likely_benign | 0.1703 | benign | 0.589 | Stabilizing | 0.001 | N | 0.227 | neutral | None | None | None | None | I |
E/S | 0.1997 | likely_benign | 0.1582 | benign | -0.054 | Destabilizing | 0.055 | N | 0.241 | neutral | None | None | None | None | I |
E/T | 0.2126 | likely_benign | 0.175 | benign | 0.085 | Stabilizing | 0.22 | N | 0.331 | neutral | None | None | None | None | I |
E/V | 0.2148 | likely_benign | 0.1843 | benign | -0.01 | Destabilizing | 0.175 | N | 0.345 | neutral | D | 0.553599986 | None | None | I |
E/W | 0.8115 | likely_pathogenic | 0.7501 | pathogenic | -0.119 | Destabilizing | 0.958 | D | 0.339 | neutral | None | None | None | None | I |
E/Y | 0.5824 | likely_pathogenic | 0.5155 | ambiguous | -0.001 | Destabilizing | 0.667 | D | 0.315 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.