Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4007 | 12244;12245;12246 | chr2:178741214;178741213;178741212 | chr2:179605941;179605940;179605939 |
N2AB | 3690 | 11293;11294;11295 | chr2:178741214;178741213;178741212 | chr2:179605941;179605940;179605939 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3644 | 11155;11156;11157 | chr2:178741214;178741213;178741212 | chr2:179605941;179605940;179605939 |
Novex-1 | 3769 | 11530;11531;11532 | chr2:178741214;178741213;178741212 | chr2:179605941;179605940;179605939 |
Novex-2 | 3836 | 11731;11732;11733 | chr2:178741214;178741213;178741212 | chr2:179605941;179605940;179605939 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs940658679 | -0.763 | 1.0 | D | 0.803 | 0.571 | 0.386721274199 | gnomAD-2.1.1 | 7.16E-06 | None | None | None | None | N | None | 0 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.40528E-04 |
G/D | rs940658679 | -0.763 | 1.0 | D | 0.803 | 0.571 | 0.386721274199 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/D | rs940658679 | -0.763 | 1.0 | D | 0.803 | 0.571 | 0.386721274199 | gnomAD-4.0.0 | 2.56384E-06 | None | None | None | None | N | None | 0 | 3.39006E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4045 | ambiguous | 0.3929 | ambiguous | -0.534 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | D | 0.650458397 | None | None | N |
G/C | 0.6903 | likely_pathogenic | 0.6374 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.83535367 | None | None | N |
G/D | 0.762 | likely_pathogenic | 0.763 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.699191542 | None | None | N |
G/E | 0.8438 | likely_pathogenic | 0.8349 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
G/F | 0.9487 | likely_pathogenic | 0.938 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
G/H | 0.929 | likely_pathogenic | 0.9134 | pathogenic | -1.177 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/I | 0.9264 | likely_pathogenic | 0.9139 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
G/K | 0.9304 | likely_pathogenic | 0.9232 | pathogenic | -1.037 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
G/L | 0.9309 | likely_pathogenic | 0.914 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
G/M | 0.9526 | likely_pathogenic | 0.9392 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
G/N | 0.8532 | likely_pathogenic | 0.8448 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
G/P | 0.9923 | likely_pathogenic | 0.992 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
G/Q | 0.8858 | likely_pathogenic | 0.8614 | pathogenic | -0.865 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
G/R | 0.8258 | likely_pathogenic | 0.804 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.835302606 | None | None | N |
G/S | 0.2967 | likely_benign | 0.2925 | benign | -1.159 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.802503295 | None | None | N |
G/T | 0.774 | likely_pathogenic | 0.7552 | pathogenic | -1.063 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
G/V | 0.8547 | likely_pathogenic | 0.8327 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.83535367 | None | None | N |
G/W | 0.9301 | likely_pathogenic | 0.9186 | pathogenic | -1.176 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
G/Y | 0.9324 | likely_pathogenic | 0.9209 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.