Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4008 | 12247;12248;12249 | chr2:178741211;178741210;178741209 | chr2:179605938;179605937;179605936 |
N2AB | 3691 | 11296;11297;11298 | chr2:178741211;178741210;178741209 | chr2:179605938;179605937;179605936 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3645 | 11158;11159;11160 | chr2:178741211;178741210;178741209 | chr2:179605938;179605937;179605936 |
Novex-1 | 3770 | 11533;11534;11535 | chr2:178741211;178741210;178741209 | chr2:179605938;179605937;179605936 |
Novex-2 | 3837 | 11734;11735;11736 | chr2:178741211;178741210;178741209 | chr2:179605938;179605937;179605936 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 0.003 | D | 0.418 | 0.268 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2494 | likely_benign | 0.2087 | benign | -1.476 | Destabilizing | 0.116 | N | 0.469 | neutral | None | None | None | None | N |
L/C | 0.3437 | ambiguous | 0.3335 | benign | -0.822 | Destabilizing | 0.981 | D | 0.553 | neutral | None | None | None | None | N |
L/D | 0.4876 | ambiguous | 0.4187 | ambiguous | -0.658 | Destabilizing | 0.69 | D | 0.592 | neutral | None | None | None | None | N |
L/E | 0.267 | likely_benign | 0.2282 | benign | -0.645 | Destabilizing | 0.388 | N | 0.576 | neutral | None | None | None | None | N |
L/F | 0.1084 | likely_benign | 0.1017 | benign | -0.936 | Destabilizing | 0.003 | N | 0.271 | neutral | N | 0.507624979 | None | None | N |
L/G | 0.4546 | ambiguous | 0.3927 | ambiguous | -1.802 | Destabilizing | 0.241 | N | 0.554 | neutral | None | None | None | None | N |
L/H | 0.1546 | likely_benign | 0.1443 | benign | -0.955 | Destabilizing | 0.003 | N | 0.418 | neutral | D | 0.528796776 | None | None | N |
L/I | 0.0775 | likely_benign | 0.0766 | benign | -0.657 | Destabilizing | 0.001 | N | 0.299 | neutral | N | 0.487322256 | None | None | N |
L/K | 0.1857 | likely_benign | 0.1638 | benign | -0.925 | Destabilizing | 0.388 | N | 0.577 | neutral | None | None | None | None | N |
L/M | 0.1264 | likely_benign | 0.1076 | benign | -0.547 | Destabilizing | 0.054 | N | 0.279 | neutral | None | None | None | None | N |
L/N | 0.2729 | likely_benign | 0.2321 | benign | -0.724 | Destabilizing | 0.527 | D | 0.591 | neutral | None | None | None | None | N |
L/P | 0.286 | likely_benign | 0.2264 | benign | -0.898 | Destabilizing | 0.773 | D | 0.594 | neutral | D | 0.607571493 | None | None | N |
L/Q | 0.1313 | likely_benign | 0.1211 | benign | -0.864 | Destabilizing | 0.69 | D | 0.593 | neutral | None | None | None | None | N |
L/R | 0.1175 | likely_benign | 0.1146 | benign | -0.386 | Destabilizing | 0.627 | D | 0.594 | neutral | N | 0.502259741 | None | None | N |
L/S | 0.2254 | likely_benign | 0.1871 | benign | -1.369 | Destabilizing | 0.008 | N | 0.396 | neutral | None | None | None | None | N |
L/T | 0.1824 | likely_benign | 0.1552 | benign | -1.235 | Destabilizing | 0.241 | N | 0.463 | neutral | None | None | None | None | N |
L/V | 0.0897 | likely_benign | 0.0852 | benign | -0.898 | Destabilizing | 0.033 | N | 0.479 | neutral | N | 0.487148192 | None | None | N |
L/W | 0.1795 | likely_benign | 0.1708 | benign | -1.0 | Destabilizing | 0.981 | D | 0.573 | neutral | None | None | None | None | N |
L/Y | 0.2363 | likely_benign | 0.2165 | benign | -0.776 | Destabilizing | 0.527 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.