Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4013 | 12262;12263;12264 | chr2:178741196;178741195;178741194 | chr2:179605923;179605922;179605921 |
N2AB | 3696 | 11311;11312;11313 | chr2:178741196;178741195;178741194 | chr2:179605923;179605922;179605921 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3650 | 11173;11174;11175 | chr2:178741196;178741195;178741194 | chr2:179605923;179605922;179605921 |
Novex-1 | 3775 | 11548;11549;11550 | chr2:178741196;178741195;178741194 | chr2:179605923;179605922;179605921 |
Novex-2 | 3842 | 11749;11750;11751 | chr2:178741196;178741195;178741194 | chr2:179605923;179605922;179605921 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs397517828 | None | 0.997 | D | 0.787 | 0.546 | None | gnomAD-4.0.0 | 1.5925E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.9313 | likely_pathogenic | 0.8908 | pathogenic | -1.773 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
A/D | 0.9907 | likely_pathogenic | 0.9829 | pathogenic | -3.019 | Highly Destabilizing | 0.995 | D | 0.868 | deleterious | None | None | None | None | N |
A/E | 0.978 | likely_pathogenic | 0.9627 | pathogenic | -2.893 | Highly Destabilizing | 0.997 | D | 0.839 | deleterious | D | 0.830703563 | None | None | N |
A/F | 0.9673 | likely_pathogenic | 0.9495 | pathogenic | -0.917 | Destabilizing | 0.999 | D | 0.902 | deleterious | None | None | None | None | N |
A/G | 0.3636 | ambiguous | 0.3283 | benign | -1.744 | Destabilizing | 0.117 | N | 0.359 | neutral | D | 0.712230398 | None | None | N |
A/H | 0.9959 | likely_pathogenic | 0.9917 | pathogenic | -1.805 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
A/I | 0.8689 | likely_pathogenic | 0.8242 | pathogenic | -0.386 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
A/K | 0.9962 | likely_pathogenic | 0.9931 | pathogenic | -1.533 | Destabilizing | 0.995 | D | 0.845 | deleterious | None | None | None | None | N |
A/L | 0.8394 | likely_pathogenic | 0.7911 | pathogenic | -0.386 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
A/M | 0.885 | likely_pathogenic | 0.8397 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
A/N | 0.9882 | likely_pathogenic | 0.9767 | pathogenic | -1.809 | Destabilizing | 0.995 | D | 0.873 | deleterious | None | None | None | None | N |
A/P | 0.9927 | likely_pathogenic | 0.9846 | pathogenic | -0.675 | Destabilizing | 0.999 | D | 0.879 | deleterious | D | 0.830703563 | None | None | N |
A/Q | 0.984 | likely_pathogenic | 0.9753 | pathogenic | -1.774 | Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
A/R | 0.9868 | likely_pathogenic | 0.9795 | pathogenic | -1.374 | Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
A/S | 0.4414 | ambiguous | 0.3577 | ambiguous | -2.12 | Highly Destabilizing | 0.977 | D | 0.566 | neutral | D | 0.760815492 | None | None | N |
A/T | 0.6146 | likely_pathogenic | 0.6723 | pathogenic | -1.898 | Destabilizing | 0.997 | D | 0.787 | deleterious | D | 0.776702479 | None | None | N |
A/V | 0.568 | likely_pathogenic | 0.4917 | ambiguous | -0.675 | Destabilizing | 0.989 | D | 0.706 | prob.neutral | D | 0.590685667 | None | None | N |
A/W | 0.9968 | likely_pathogenic | 0.9939 | pathogenic | -1.526 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
A/Y | 0.9885 | likely_pathogenic | 0.9802 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.