Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4019 | 12280;12281;12282 | chr2:178741178;178741177;178741176 | chr2:179605905;179605904;179605903 |
N2AB | 3702 | 11329;11330;11331 | chr2:178741178;178741177;178741176 | chr2:179605905;179605904;179605903 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3656 | 11191;11192;11193 | chr2:178741178;178741177;178741176 | chr2:179605905;179605904;179605903 |
Novex-1 | 3781 | 11566;11567;11568 | chr2:178741178;178741177;178741176 | chr2:179605905;179605904;179605903 |
Novex-2 | 3848 | 11767;11768;11769 | chr2:178741178;178741177;178741176 | chr2:179605905;179605904;179605903 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | None | N | 0.198 | 0.113 | None | gnomAD-4.0.0 | 4.77686E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41313E-04 | 2.85791E-06 | 0 | 3.02444E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.144 | likely_benign | 0.1607 | benign | -0.523 | Destabilizing | None | N | 0.208 | neutral | D | 0.574708127 | None | None | I |
E/C | 0.8339 | likely_pathogenic | 0.8199 | pathogenic | -0.011 | Destabilizing | 0.824 | D | 0.537 | neutral | None | None | None | None | I |
E/D | 0.2596 | likely_benign | 0.241 | benign | -0.515 | Destabilizing | 0.117 | N | 0.3 | neutral | D | 0.583705652 | None | None | I |
E/F | 0.6827 | likely_pathogenic | 0.6613 | pathogenic | -0.444 | Destabilizing | 0.555 | D | 0.543 | neutral | None | None | None | None | I |
E/G | 0.1972 | likely_benign | 0.1903 | benign | -0.739 | Destabilizing | None | N | 0.307 | neutral | D | 0.58484413 | None | None | I |
E/H | 0.496 | ambiguous | 0.4853 | ambiguous | -0.377 | Destabilizing | 0.38 | N | 0.453 | neutral | None | None | None | None | I |
E/I | 0.3427 | ambiguous | 0.3402 | ambiguous | 0.019 | Stabilizing | 0.38 | N | 0.553 | neutral | None | None | None | None | I |
E/K | 0.1299 | likely_benign | 0.1344 | benign | 0.229 | Stabilizing | None | N | 0.198 | neutral | N | 0.507653416 | None | None | I |
E/L | 0.4788 | ambiguous | 0.4803 | ambiguous | 0.019 | Stabilizing | 0.081 | N | 0.541 | neutral | None | None | None | None | I |
E/M | 0.4322 | ambiguous | 0.4333 | ambiguous | 0.263 | Stabilizing | 0.824 | D | 0.521 | neutral | None | None | None | None | I |
E/N | 0.3398 | likely_benign | 0.3306 | benign | -0.069 | Destabilizing | 0.149 | N | 0.399 | neutral | None | None | None | None | I |
E/P | 0.9085 | likely_pathogenic | 0.8764 | pathogenic | -0.141 | Destabilizing | 0.555 | D | 0.457 | neutral | None | None | None | None | I |
E/Q | 0.1291 | likely_benign | 0.1311 | benign | -0.053 | Destabilizing | 0.001 | N | 0.189 | neutral | N | 0.507601806 | None | None | I |
E/R | 0.2509 | likely_benign | 0.2461 | benign | 0.383 | Stabilizing | 0.081 | N | 0.404 | neutral | None | None | None | None | I |
E/S | 0.1953 | likely_benign | 0.2005 | benign | -0.248 | Destabilizing | 0.035 | N | 0.303 | neutral | None | None | None | None | I |
E/T | 0.2052 | likely_benign | 0.2057 | benign | -0.074 | Destabilizing | 0.002 | N | 0.253 | neutral | None | None | None | None | I |
E/V | 0.2039 | likely_benign | 0.2023 | benign | -0.141 | Destabilizing | 0.062 | N | 0.531 | neutral | D | 0.542278259 | None | None | I |
E/W | 0.9025 | likely_pathogenic | 0.878 | pathogenic | -0.281 | Destabilizing | 0.935 | D | 0.58 | neutral | None | None | None | None | I |
E/Y | 0.6184 | likely_pathogenic | 0.5996 | pathogenic | -0.192 | Destabilizing | 0.555 | D | 0.533 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.