Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4020 | 12283;12284;12285 | chr2:178741175;178741174;178741173 | chr2:179605902;179605901;179605900 |
N2AB | 3703 | 11332;11333;11334 | chr2:178741175;178741174;178741173 | chr2:179605902;179605901;179605900 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3657 | 11194;11195;11196 | chr2:178741175;178741174;178741173 | chr2:179605902;179605901;179605900 |
Novex-1 | 3782 | 11569;11570;11571 | chr2:178741175;178741174;178741173 | chr2:179605902;179605901;179605900 |
Novex-2 | 3849 | 11770;11771;11772 | chr2:178741175;178741174;178741173 | chr2:179605902;179605901;179605900 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | rs1273620132 | -0.361 | 0.56 | D | 0.598 | 0.292 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
S/Y | rs1273620132 | -0.361 | 0.56 | D | 0.598 | 0.292 | None | gnomAD-4.0.0 | 2.73764E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69831E-06 | 0 | 1.65667E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0785 | likely_benign | 0.0835 | benign | -0.744 | Destabilizing | None | N | 0.092 | neutral | N | 0.412188418 | None | None | I |
S/C | 0.1294 | likely_benign | 0.1192 | benign | -0.492 | Destabilizing | None | N | 0.431 | neutral | D | 0.577622495 | None | None | I |
S/D | 0.3461 | ambiguous | 0.3116 | benign | -0.24 | Destabilizing | 0.072 | N | 0.421 | neutral | None | None | None | None | I |
S/E | 0.535 | ambiguous | 0.5234 | ambiguous | -0.207 | Destabilizing | 0.072 | N | 0.394 | neutral | None | None | None | None | I |
S/F | 0.3407 | ambiguous | 0.3532 | ambiguous | -0.736 | Destabilizing | 0.171 | N | 0.615 | neutral | D | 0.577770987 | None | None | I |
S/G | 0.1571 | likely_benign | 0.1327 | benign | -1.038 | Destabilizing | 0.016 | N | 0.398 | neutral | None | None | None | None | I |
S/H | 0.4846 | ambiguous | 0.4573 | ambiguous | -1.43 | Destabilizing | 0.628 | D | 0.542 | neutral | None | None | None | None | I |
S/I | 0.2432 | likely_benign | 0.2599 | benign | -0.059 | Destabilizing | 0.016 | N | 0.53 | neutral | None | None | None | None | I |
S/K | 0.7446 | likely_pathogenic | 0.7181 | pathogenic | -0.685 | Destabilizing | 0.072 | N | 0.393 | neutral | None | None | None | None | I |
S/L | 0.1761 | likely_benign | 0.2003 | benign | -0.059 | Destabilizing | 0.016 | N | 0.541 | neutral | None | None | None | None | I |
S/M | 0.2845 | likely_benign | 0.2992 | benign | 0.093 | Stabilizing | 0.356 | N | 0.554 | neutral | None | None | None | None | I |
S/N | 0.1907 | likely_benign | 0.1744 | benign | -0.701 | Destabilizing | 0.072 | N | 0.441 | neutral | None | None | None | None | I |
S/P | 0.9347 | likely_pathogenic | 0.8929 | pathogenic | -0.252 | Destabilizing | 0.106 | N | 0.564 | neutral | D | 0.577622495 | None | None | I |
S/Q | 0.6088 | likely_pathogenic | 0.5844 | pathogenic | -0.769 | Destabilizing | 0.356 | N | 0.512 | neutral | None | None | None | None | I |
S/R | 0.6568 | likely_pathogenic | 0.6246 | pathogenic | -0.654 | Destabilizing | 0.072 | N | 0.563 | neutral | None | None | None | None | I |
S/T | 0.0987 | likely_benign | 0.1044 | benign | -0.692 | Destabilizing | None | N | 0.137 | neutral | N | 0.485524716 | None | None | I |
S/V | 0.2186 | likely_benign | 0.2439 | benign | -0.252 | Destabilizing | None | N | 0.37 | neutral | None | None | None | None | I |
S/W | 0.5629 | ambiguous | 0.5317 | ambiguous | -0.736 | Destabilizing | 0.864 | D | 0.604 | neutral | None | None | None | None | I |
S/Y | 0.2548 | likely_benign | 0.2517 | benign | -0.462 | Destabilizing | 0.56 | D | 0.598 | neutral | D | 0.601225419 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.