Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4021 | 12286;12287;12288 | chr2:178741172;178741171;178741170 | chr2:179605899;179605898;179605897 |
N2AB | 3704 | 11335;11336;11337 | chr2:178741172;178741171;178741170 | chr2:179605899;179605898;179605897 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3658 | 11197;11198;11199 | chr2:178741172;178741171;178741170 | chr2:179605899;179605898;179605897 |
Novex-1 | 3783 | 11572;11573;11574 | chr2:178741172;178741171;178741170 | chr2:179605899;179605898;179605897 |
Novex-2 | 3850 | 11773;11774;11775 | chr2:178741172;178741171;178741170 | chr2:179605899;179605898;179605897 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs770837770 | -0.565 | 0.001 | N | 0.245 | 0.103 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.30736E-04 | None | 0 | 0 | 0 |
T/S | rs770837770 | -0.565 | 0.001 | N | 0.245 | 0.103 | None | gnomAD-4.0.0 | 1.59215E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85789E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0863 | likely_benign | 0.0807 | benign | -0.681 | Destabilizing | None | N | 0.231 | neutral | N | 0.517848947 | None | None | I |
T/C | 0.4167 | ambiguous | 0.3887 | ambiguous | -0.301 | Destabilizing | 0.667 | D | 0.589 | neutral | None | None | None | None | I |
T/D | 0.3642 | ambiguous | 0.3482 | ambiguous | 0.269 | Stabilizing | 0.22 | N | 0.512 | neutral | None | None | None | None | I |
T/E | 0.2823 | likely_benign | 0.2894 | benign | 0.247 | Stabilizing | 0.22 | N | 0.53 | neutral | None | None | None | None | I |
T/F | 0.1931 | likely_benign | 0.2033 | benign | -0.897 | Destabilizing | 0.497 | N | 0.608 | neutral | None | None | None | None | I |
T/G | 0.3049 | likely_benign | 0.2847 | benign | -0.893 | Destabilizing | 0.055 | N | 0.508 | neutral | None | None | None | None | I |
T/H | 0.2334 | likely_benign | 0.2343 | benign | -1.048 | Destabilizing | 0.667 | D | 0.584 | neutral | None | None | None | None | I |
T/I | 0.1448 | likely_benign | 0.1415 | benign | -0.217 | Destabilizing | 0.001 | N | 0.405 | neutral | N | 0.51385975 | None | None | I |
T/K | 0.1977 | likely_benign | 0.1997 | benign | -0.475 | Destabilizing | 0.124 | N | 0.529 | neutral | None | None | None | None | I |
T/L | 0.1081 | likely_benign | 0.1084 | benign | -0.217 | Destabilizing | 0.02 | N | 0.481 | neutral | None | None | None | None | I |
T/M | 0.1127 | likely_benign | 0.1224 | benign | -0.08 | Destabilizing | 0.497 | N | 0.595 | neutral | None | None | None | None | I |
T/N | 0.1308 | likely_benign | 0.1273 | benign | -0.289 | Destabilizing | 0.096 | N | 0.474 | neutral | N | 0.517973661 | None | None | I |
T/P | 0.2056 | likely_benign | 0.1711 | benign | -0.34 | Destabilizing | 0.001 | N | 0.426 | neutral | D | 0.64179754 | None | None | I |
T/Q | 0.2331 | likely_benign | 0.2449 | benign | -0.424 | Destabilizing | 0.497 | N | 0.639 | neutral | None | None | None | None | I |
T/R | 0.1436 | likely_benign | 0.1503 | benign | -0.235 | Destabilizing | 0.497 | N | 0.631 | neutral | None | None | None | None | I |
T/S | 0.1089 | likely_benign | 0.1103 | benign | -0.592 | Destabilizing | 0.001 | N | 0.245 | neutral | N | 0.440416847 | None | None | I |
T/V | 0.1394 | likely_benign | 0.1327 | benign | -0.34 | Destabilizing | 0.02 | N | 0.453 | neutral | None | None | None | None | I |
T/W | 0.581 | likely_pathogenic | 0.5672 | pathogenic | -0.864 | Destabilizing | 0.958 | D | 0.62 | neutral | None | None | None | None | I |
T/Y | 0.2462 | likely_benign | 0.2401 | benign | -0.619 | Destabilizing | 0.667 | D | 0.599 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.