Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4023 | 12292;12293;12294 | chr2:178741166;178741165;178741164 | chr2:179605893;179605892;179605891 |
N2AB | 3706 | 11341;11342;11343 | chr2:178741166;178741165;178741164 | chr2:179605893;179605892;179605891 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3660 | 11203;11204;11205 | chr2:178741166;178741165;178741164 | chr2:179605893;179605892;179605891 |
Novex-1 | 3785 | 11578;11579;11580 | chr2:178741166;178741165;178741164 | chr2:179605893;179605892;179605891 |
Novex-2 | 3852 | 11779;11780;11781 | chr2:178741166;178741165;178741164 | chr2:179605893;179605892;179605891 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | None | N | 0.218 | 0.056 | None | gnomAD-4.0.0 | 1.59211E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4467 | ambiguous | 0.4186 | ambiguous | -0.75 | Destabilizing | 0.356 | N | 0.527 | neutral | None | None | None | None | I |
A/D | 0.3444 | ambiguous | 0.3373 | benign | -0.869 | Destabilizing | 0.072 | N | 0.543 | neutral | None | None | None | None | I |
A/E | 0.2197 | likely_benign | 0.2146 | benign | -0.924 | Destabilizing | 0.029 | N | 0.415 | neutral | N | 0.473135512 | None | None | I |
A/F | 0.3274 | likely_benign | 0.3203 | benign | -0.886 | Destabilizing | 0.214 | N | 0.617 | neutral | None | None | None | None | I |
A/G | 0.1871 | likely_benign | 0.1942 | benign | -0.943 | Destabilizing | None | N | 0.195 | neutral | N | 0.503816964 | None | None | I |
A/H | 0.4386 | ambiguous | 0.4356 | ambiguous | -1.111 | Destabilizing | 0.356 | N | 0.575 | neutral | None | None | None | None | I |
A/I | 0.2489 | likely_benign | 0.2435 | benign | -0.269 | Destabilizing | 0.013 | N | 0.448 | neutral | None | None | None | None | I |
A/K | 0.303 | likely_benign | 0.3005 | benign | -1.142 | Destabilizing | None | N | 0.261 | neutral | None | None | None | None | I |
A/L | 0.2125 | likely_benign | 0.209 | benign | -0.269 | Destabilizing | 0.016 | N | 0.382 | neutral | None | None | None | None | I |
A/M | 0.2313 | likely_benign | 0.2305 | benign | -0.267 | Destabilizing | 0.214 | N | 0.562 | neutral | None | None | None | None | I |
A/N | 0.2976 | likely_benign | 0.3024 | benign | -0.775 | Destabilizing | 0.072 | N | 0.548 | neutral | None | None | None | None | I |
A/P | 0.4007 | ambiguous | 0.4071 | ambiguous | -0.378 | Destabilizing | 0.106 | N | 0.553 | neutral | N | 0.511468128 | None | None | I |
A/Q | 0.2978 | likely_benign | 0.2942 | benign | -0.936 | Destabilizing | 0.12 | N | 0.594 | neutral | None | None | None | None | I |
A/R | 0.2502 | likely_benign | 0.2423 | benign | -0.782 | Destabilizing | 0.038 | N | 0.546 | neutral | None | None | None | None | I |
A/S | 0.1033 | likely_benign | 0.1045 | benign | -1.086 | Destabilizing | None | N | 0.163 | neutral | N | 0.374016683 | None | None | I |
A/T | 0.0832 | likely_benign | 0.0871 | benign | -1.046 | Destabilizing | None | N | 0.218 | neutral | N | 0.401670663 | None | None | I |
A/V | 0.1402 | likely_benign | 0.1382 | benign | -0.378 | Destabilizing | None | N | 0.195 | neutral | N | 0.499033664 | None | None | I |
A/W | 0.7195 | likely_pathogenic | 0.6924 | pathogenic | -1.205 | Destabilizing | 0.864 | D | 0.603 | neutral | None | None | None | None | I |
A/Y | 0.4546 | ambiguous | 0.4328 | ambiguous | -0.809 | Destabilizing | 0.356 | N | 0.602 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.