Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4024 | 12295;12296;12297 | chr2:178741163;178741162;178741161 | chr2:179605890;179605889;179605888 |
N2AB | 3707 | 11344;11345;11346 | chr2:178741163;178741162;178741161 | chr2:179605890;179605889;179605888 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3661 | 11206;11207;11208 | chr2:178741163;178741162;178741161 | chr2:179605890;179605889;179605888 |
Novex-1 | 3786 | 11581;11582;11583 | chr2:178741163;178741162;178741161 | chr2:179605890;179605889;179605888 |
Novex-2 | 3853 | 11782;11783;11784 | chr2:178741163;178741162;178741161 | chr2:179605890;179605889;179605888 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.977 | D | 0.675 | 0.418 | None | gnomAD-4.0.0 | 3.42172E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59774E-06 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7626 | likely_pathogenic | 0.7544 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
A/D | 0.9199 | likely_pathogenic | 0.8721 | pathogenic | -1.732 | Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | I |
A/E | 0.8848 | likely_pathogenic | 0.8184 | pathogenic | -1.554 | Destabilizing | 0.997 | D | 0.849 | deleterious | D | 0.695573458 | None | None | I |
A/F | 0.9154 | likely_pathogenic | 0.8699 | pathogenic | -0.562 | Destabilizing | 0.995 | D | 0.899 | deleterious | None | None | None | None | I |
A/G | 0.2774 | likely_benign | 0.2796 | benign | -1.332 | Destabilizing | 0.989 | D | 0.621 | neutral | D | 0.52321945 | None | None | I |
A/H | 0.965 | likely_pathogenic | 0.9434 | pathogenic | -1.767 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
A/I | 0.7856 | likely_pathogenic | 0.7641 | pathogenic | 0.379 | Stabilizing | 0.966 | D | 0.787 | deleterious | None | None | None | None | I |
A/K | 0.9528 | likely_pathogenic | 0.9174 | pathogenic | -1.095 | Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | I |
A/L | 0.7293 | likely_pathogenic | 0.6752 | pathogenic | 0.379 | Stabilizing | 0.966 | D | 0.655 | neutral | None | None | None | None | I |
A/M | 0.7419 | likely_pathogenic | 0.7087 | pathogenic | 0.238 | Stabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | I |
A/N | 0.8988 | likely_pathogenic | 0.8661 | pathogenic | -1.251 | Destabilizing | 0.999 | D | 0.9 | deleterious | None | None | None | None | I |
A/P | 0.9668 | likely_pathogenic | 0.9547 | pathogenic | 0.012 | Stabilizing | 0.999 | D | 0.877 | deleterious | D | 0.733867162 | None | None | I |
A/Q | 0.9001 | likely_pathogenic | 0.8507 | pathogenic | -1.08 | Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | I |
A/R | 0.903 | likely_pathogenic | 0.8404 | pathogenic | -1.187 | Destabilizing | 0.998 | D | 0.872 | deleterious | None | None | None | None | I |
A/S | 0.2006 | likely_benign | 0.212 | benign | -1.696 | Destabilizing | 0.989 | D | 0.633 | neutral | D | 0.590506967 | None | None | I |
A/T | 0.2432 | likely_benign | 0.2562 | benign | -1.382 | Destabilizing | 0.977 | D | 0.675 | neutral | D | 0.566074726 | None | None | I |
A/V | 0.4056 | ambiguous | 0.3872 | ambiguous | 0.012 | Stabilizing | 0.235 | N | 0.414 | neutral | N | 0.51480646 | None | None | I |
A/W | 0.9879 | likely_pathogenic | 0.9797 | pathogenic | -1.308 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | I |
A/Y | 0.9605 | likely_pathogenic | 0.9364 | pathogenic | -0.691 | Destabilizing | 0.999 | D | 0.907 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.