Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4615 | 14068;14069;14070 | chr2:178739390;178739389;178739388 | chr2:179604117;179604116;179604115 |
N2AB | 4298 | 13117;13118;13119 | chr2:178739390;178739389;178739388 | chr2:179604117;179604116;179604115 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4252 | 12979;12980;12981 | chr2:178739390;178739389;178739388 | chr2:179604117;179604116;179604115 |
Novex-1 | 4377 | 13354;13355;13356 | chr2:178739390;178739389;178739388 | chr2:179604117;179604116;179604115 |
Novex-2 | 4444 | 13555;13556;13557 | chr2:178739390;178739389;178739388 | chr2:179604117;179604116;179604115 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs751677635 | -0.959 | None | N | 0.099 | 0.112 | 0.0297737177859 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
T/A | rs751677635 | -0.959 | None | N | 0.099 | 0.112 | 0.0297737177859 | gnomAD-4.0.0 | 1.36838E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7989E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0805 | likely_benign | 0.0933 | benign | -0.707 | Destabilizing | None | N | 0.099 | neutral | N | 0.507271038 | None | None | N |
T/C | 0.3301 | likely_benign | 0.3845 | ambiguous | -0.445 | Destabilizing | 0.667 | D | 0.482 | neutral | None | None | None | None | N |
T/D | 0.2883 | likely_benign | 0.3599 | ambiguous | 0.02 | Stabilizing | 0.124 | N | 0.5 | neutral | None | None | None | None | N |
T/E | 0.2082 | likely_benign | 0.2668 | benign | 0.011 | Stabilizing | 0.22 | N | 0.457 | neutral | None | None | None | None | N |
T/F | 0.1654 | likely_benign | 0.2076 | benign | -0.846 | Destabilizing | 0.497 | N | 0.529 | neutral | None | None | None | None | N |
T/G | 0.2514 | likely_benign | 0.3086 | benign | -0.951 | Destabilizing | 0.055 | N | 0.449 | neutral | None | None | None | None | N |
T/H | 0.1907 | likely_benign | 0.2275 | benign | -1.289 | Destabilizing | 0.667 | D | 0.494 | neutral | None | None | None | None | N |
T/I | 0.0928 | likely_benign | 0.1152 | benign | -0.156 | Destabilizing | None | N | 0.209 | neutral | N | 0.484742717 | None | None | N |
T/K | 0.1309 | likely_benign | 0.1621 | benign | -0.641 | Destabilizing | 0.22 | N | 0.456 | neutral | None | None | None | None | N |
T/L | 0.0848 | likely_benign | 0.1024 | benign | -0.156 | Destabilizing | None | N | 0.199 | neutral | None | None | None | None | N |
T/M | 0.078 | likely_benign | 0.0891 | benign | 0.083 | Stabilizing | 0.497 | N | 0.497 | neutral | None | None | None | None | N |
T/N | 0.1238 | likely_benign | 0.1531 | benign | -0.546 | Destabilizing | 0.001 | N | 0.307 | neutral | D | 0.583699543 | None | None | N |
T/P | 0.3852 | ambiguous | 0.4595 | ambiguous | -0.307 | Destabilizing | 0.602 | D | 0.519 | neutral | D | 0.6475337 | None | None | N |
T/Q | 0.1933 | likely_benign | 0.2333 | benign | -0.695 | Destabilizing | 0.667 | D | 0.496 | neutral | None | None | None | None | N |
T/R | 0.1063 | likely_benign | 0.1232 | benign | -0.472 | Destabilizing | 0.497 | N | 0.519 | neutral | None | None | None | None | N |
T/S | 0.1184 | likely_benign | 0.1438 | benign | -0.83 | Destabilizing | 0.042 | N | 0.39 | neutral | D | 0.581594621 | None | None | N |
T/V | 0.0916 | likely_benign | 0.1149 | benign | -0.307 | Destabilizing | None | N | 0.119 | neutral | None | None | None | None | N |
T/W | 0.4898 | ambiguous | 0.551 | ambiguous | -0.79 | Destabilizing | 0.958 | D | 0.521 | neutral | None | None | None | None | N |
T/Y | 0.2105 | likely_benign | 0.2608 | benign | -0.544 | Destabilizing | 0.667 | D | 0.506 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.