Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4621 | 14086;14087;14088 | chr2:178739372;178739371;178739370 | chr2:179604099;179604098;179604097 |
N2AB | 4304 | 13135;13136;13137 | chr2:178739372;178739371;178739370 | chr2:179604099;179604098;179604097 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4258 | 12997;12998;12999 | chr2:178739372;178739371;178739370 | chr2:179604099;179604098;179604097 |
Novex-1 | 4383 | 13372;13373;13374 | chr2:178739372;178739371;178739370 | chr2:179604099;179604098;179604097 |
Novex-2 | 4450 | 13573;13574;13575 | chr2:178739372;178739371;178739370 | chr2:179604099;179604098;179604097 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.003 | N | 0.163 | 0.089 | 0.226586394389 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85802E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1448 | likely_benign | 0.1262 | benign | -0.696 | Destabilizing | 0.309 | N | 0.349 | neutral | N | 0.494765878 | None | None | N |
D/C | 0.4205 | ambiguous | 0.3842 | ambiguous | -0.155 | Destabilizing | 0.996 | D | 0.441 | neutral | None | None | None | None | N |
D/E | 0.1722 | likely_benign | 0.1556 | benign | -0.544 | Destabilizing | 0.007 | N | 0.226 | neutral | N | 0.444264531 | None | None | N |
D/F | 0.4571 | ambiguous | 0.4061 | ambiguous | -0.536 | Destabilizing | 0.984 | D | 0.436 | neutral | None | None | None | None | N |
D/G | 0.1138 | likely_benign | 0.1048 | benign | -0.948 | Destabilizing | 0.003 | N | 0.163 | neutral | N | 0.453054522 | None | None | N |
D/H | 0.2031 | likely_benign | 0.1833 | benign | -0.632 | Destabilizing | 0.939 | D | 0.335 | neutral | N | 0.487917474 | None | None | N |
D/I | 0.3499 | ambiguous | 0.2989 | benign | -0.058 | Destabilizing | 0.953 | D | 0.457 | neutral | None | None | None | None | N |
D/K | 0.2629 | likely_benign | 0.2423 | benign | -0.047 | Destabilizing | 0.59 | D | 0.321 | neutral | None | None | None | None | N |
D/L | 0.3735 | ambiguous | 0.3187 | benign | -0.058 | Destabilizing | 0.742 | D | 0.443 | neutral | None | None | None | None | N |
D/M | 0.5177 | ambiguous | 0.4635 | ambiguous | 0.314 | Stabilizing | 0.996 | D | 0.424 | neutral | None | None | None | None | N |
D/N | 0.0828 | likely_benign | 0.0773 | benign | -0.426 | Destabilizing | 0.007 | N | 0.309 | neutral | N | 0.436207575 | None | None | N |
D/P | 0.8432 | likely_pathogenic | 0.8082 | pathogenic | -0.248 | Destabilizing | 0.953 | D | 0.351 | neutral | None | None | None | None | N |
D/Q | 0.2543 | likely_benign | 0.2291 | benign | -0.386 | Destabilizing | 0.835 | D | 0.325 | neutral | None | None | None | None | N |
D/R | 0.2848 | likely_benign | 0.2616 | benign | 0.087 | Stabilizing | 0.91 | D | 0.427 | neutral | None | None | None | None | N |
D/S | 0.0987 | likely_benign | 0.09 | benign | -0.581 | Destabilizing | 0.016 | N | 0.124 | neutral | None | None | None | None | N |
D/T | 0.22 | likely_benign | 0.1892 | benign | -0.38 | Destabilizing | 0.59 | D | 0.329 | neutral | None | None | None | None | N |
D/V | 0.2282 | likely_benign | 0.1967 | benign | -0.248 | Destabilizing | 0.939 | D | 0.449 | neutral | D | 0.565248807 | None | None | N |
D/W | 0.7938 | likely_pathogenic | 0.7699 | pathogenic | -0.328 | Destabilizing | 0.996 | D | 0.553 | neutral | None | None | None | None | N |
D/Y | 0.1683 | likely_benign | 0.1569 | benign | -0.289 | Destabilizing | 0.979 | D | 0.437 | neutral | N | 0.441021868 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.