Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4623 | 14092;14093;14094 | chr2:178739366;178739365;178739364 | chr2:179604093;179604092;179604091 |
N2AB | 4306 | 13141;13142;13143 | chr2:178739366;178739365;178739364 | chr2:179604093;179604092;179604091 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4260 | 13003;13004;13005 | chr2:178739366;178739365;178739364 | chr2:179604093;179604092;179604091 |
Novex-1 | 4385 | 13378;13379;13380 | chr2:178739366;178739365;178739364 | chr2:179604093;179604092;179604091 |
Novex-2 | 4452 | 13579;13580;13581 | chr2:178739366;178739365;178739364 | chr2:179604093;179604092;179604091 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.253 | 0.092 | None | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77485E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2084 | likely_benign | 0.2385 | benign | -1.98 | Destabilizing | 0.001 | N | 0.285 | neutral | N | 0.453818228 | None | None | N |
V/C | 0.6334 | likely_pathogenic | 0.6676 | pathogenic | -1.305 | Destabilizing | 0.935 | D | 0.763 | deleterious | None | None | None | None | N |
V/D | 0.6923 | likely_pathogenic | 0.7581 | pathogenic | -2.217 | Highly Destabilizing | 0.555 | D | 0.817 | deleterious | None | None | None | None | N |
V/E | 0.6006 | likely_pathogenic | 0.662 | pathogenic | -2.088 | Highly Destabilizing | 0.484 | N | 0.803 | deleterious | D | 0.659305299 | None | None | N |
V/F | 0.1991 | likely_benign | 0.2289 | benign | -1.265 | Destabilizing | 0.001 | N | 0.555 | neutral | None | None | None | None | N |
V/G | 0.3436 | ambiguous | 0.3938 | ambiguous | -2.436 | Highly Destabilizing | 0.062 | N | 0.755 | deleterious | D | 0.620731685 | None | None | N |
V/H | 0.7239 | likely_pathogenic | 0.7852 | pathogenic | -2.02 | Highly Destabilizing | 0.935 | D | 0.784 | deleterious | None | None | None | None | N |
V/I | 0.0719 | likely_benign | 0.0729 | benign | -0.753 | Destabilizing | None | N | 0.253 | neutral | N | 0.454805361 | None | None | N |
V/K | 0.6183 | likely_pathogenic | 0.6841 | pathogenic | -1.796 | Destabilizing | 0.38 | N | 0.803 | deleterious | None | None | None | None | N |
V/L | 0.1905 | likely_benign | 0.2137 | benign | -0.753 | Destabilizing | 0.004 | N | 0.557 | neutral | N | 0.435646263 | None | None | N |
V/M | 0.1901 | likely_benign | 0.2137 | benign | -0.554 | Destabilizing | 0.38 | N | 0.661 | neutral | None | None | None | None | N |
V/N | 0.5362 | ambiguous | 0.6007 | pathogenic | -1.826 | Destabilizing | 0.555 | D | 0.817 | deleterious | None | None | None | None | N |
V/P | 0.8306 | likely_pathogenic | 0.865 | pathogenic | -1.132 | Destabilizing | 0.555 | D | 0.81 | deleterious | None | None | None | None | N |
V/Q | 0.5561 | ambiguous | 0.6212 | pathogenic | -1.823 | Destabilizing | 0.555 | D | 0.779 | deleterious | None | None | None | None | N |
V/R | 0.5183 | ambiguous | 0.5883 | pathogenic | -1.382 | Destabilizing | 0.555 | D | 0.819 | deleterious | None | None | None | None | N |
V/S | 0.3074 | likely_benign | 0.3536 | ambiguous | -2.411 | Highly Destabilizing | 0.081 | N | 0.735 | prob.delet. | None | None | None | None | N |
V/T | 0.2204 | likely_benign | 0.2443 | benign | -2.156 | Highly Destabilizing | 0.149 | N | 0.7 | prob.neutral | None | None | None | None | N |
V/W | 0.8509 | likely_pathogenic | 0.8802 | pathogenic | -1.666 | Destabilizing | 0.935 | D | 0.775 | deleterious | None | None | None | None | N |
V/Y | 0.6188 | likely_pathogenic | 0.6801 | pathogenic | -1.328 | Destabilizing | 0.235 | N | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.