Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4626 | 14101;14102;14103 | chr2:178739357;178739356;178739355 | chr2:179604084;179604083;179604082 |
N2AB | 4309 | 13150;13151;13152 | chr2:178739357;178739356;178739355 | chr2:179604084;179604083;179604082 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4263 | 13012;13013;13014 | chr2:178739357;178739356;178739355 | chr2:179604084;179604083;179604082 |
Novex-1 | 4388 | 13387;13388;13389 | chr2:178739357;178739356;178739355 | chr2:179604084;179604083;179604082 |
Novex-2 | 4455 | 13588;13589;13590 | chr2:178739357;178739356;178739355 | chr2:179604084;179604083;179604082 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | rs886039164 | None | 0.029 | N | 0.479 | 0.067 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/K | rs886039164 | None | 0.029 | N | 0.479 | 0.067 | None | gnomAD-4.0.0 | 2.56214E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78556E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.087 | likely_benign | 0.0888 | benign | -1.058 | Destabilizing | None | N | 0.247 | neutral | N | 0.50893731 | None | None | I |
T/C | 0.3763 | ambiguous | 0.3757 | ambiguous | -0.625 | Destabilizing | 0.356 | N | 0.546 | neutral | None | None | None | None | I |
T/D | 0.3122 | likely_benign | 0.344 | ambiguous | -0.237 | Destabilizing | 0.072 | N | 0.487 | neutral | None | None | None | None | I |
T/E | 0.208 | likely_benign | 0.2158 | benign | -0.227 | Destabilizing | 0.038 | N | 0.485 | neutral | None | None | None | None | I |
T/F | 0.2061 | likely_benign | 0.2152 | benign | -1.219 | Destabilizing | 0.214 | N | 0.593 | neutral | None | None | None | None | I |
T/G | 0.2349 | likely_benign | 0.2616 | benign | -1.315 | Destabilizing | 0.016 | N | 0.491 | neutral | None | None | None | None | I |
T/H | 0.1975 | likely_benign | 0.2006 | benign | -1.6 | Destabilizing | 0.356 | N | 0.575 | neutral | None | None | None | None | I |
T/I | 0.1371 | likely_benign | 0.1432 | benign | -0.458 | Destabilizing | 0.029 | N | 0.483 | neutral | D | 0.602563693 | None | None | I |
T/K | 0.1286 | likely_benign | 0.1256 | benign | -0.681 | Destabilizing | 0.029 | N | 0.479 | neutral | N | 0.510966168 | None | None | I |
T/L | 0.1089 | likely_benign | 0.1102 | benign | -0.458 | Destabilizing | 0.006 | N | 0.435 | neutral | None | None | None | None | I |
T/M | 0.0973 | likely_benign | 0.092 | benign | -0.059 | Destabilizing | 0.002 | N | 0.389 | neutral | None | None | None | None | I |
T/N | 0.1211 | likely_benign | 0.1281 | benign | -0.67 | Destabilizing | 0.038 | N | 0.395 | neutral | None | None | None | None | I |
T/P | 0.214 | likely_benign | 0.2586 | benign | -0.627 | Destabilizing | 0.055 | N | 0.556 | neutral | D | 0.584812223 | None | None | I |
T/Q | 0.1649 | likely_benign | 0.1547 | benign | -0.85 | Destabilizing | 0.002 | N | 0.389 | neutral | None | None | None | None | I |
T/R | 0.1126 | likely_benign | 0.1068 | benign | -0.469 | Destabilizing | 0.029 | N | 0.541 | neutral | N | 0.514371176 | None | None | I |
T/S | 0.1064 | likely_benign | 0.1095 | benign | -1.011 | Destabilizing | None | N | 0.288 | neutral | N | 0.485689695 | None | None | I |
T/V | 0.1233 | likely_benign | 0.1261 | benign | -0.627 | Destabilizing | None | N | 0.267 | neutral | None | None | None | None | I |
T/W | 0.5736 | likely_pathogenic | 0.5699 | pathogenic | -1.104 | Destabilizing | 0.864 | D | 0.609 | neutral | None | None | None | None | I |
T/Y | 0.2533 | likely_benign | 0.256 | benign | -0.868 | Destabilizing | 0.356 | N | 0.581 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.