Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4630 | 14113;14114;14115 | chr2:178739345;178739344;178739343 | chr2:179604072;179604071;179604070 |
N2AB | 4313 | 13162;13163;13164 | chr2:178739345;178739344;178739343 | chr2:179604072;179604071;179604070 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4267 | 13024;13025;13026 | chr2:178739345;178739344;178739343 | chr2:179604072;179604071;179604070 |
Novex-1 | 4392 | 13399;13400;13401 | chr2:178739345;178739344;178739343 | chr2:179604072;179604071;179604070 |
Novex-2 | 4459 | 13600;13601;13602 | chr2:178739345;178739344;178739343 | chr2:179604072;179604071;179604070 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs766878814 | 0.262 | None | N | 0.169 | 0.09 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/I | rs766878814 | 0.262 | None | N | 0.169 | 0.09 | None | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85806E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0822 | likely_benign | 0.0927 | benign | -0.818 | Destabilizing | None | N | 0.067 | neutral | N | 0.506839445 | None | None | N |
T/C | 0.3366 | likely_benign | 0.3647 | ambiguous | -0.342 | Destabilizing | 0.356 | N | 0.274 | neutral | None | None | None | None | N |
T/D | 0.2291 | likely_benign | 0.2741 | benign | -0.827 | Destabilizing | 0.038 | N | 0.285 | neutral | None | None | None | None | N |
T/E | 0.1676 | likely_benign | 0.2038 | benign | -0.788 | Destabilizing | None | N | 0.169 | neutral | None | None | None | None | N |
T/F | 0.1881 | likely_benign | 0.2184 | benign | -0.632 | Destabilizing | 0.12 | N | 0.401 | neutral | None | None | None | None | N |
T/G | 0.1893 | likely_benign | 0.2219 | benign | -1.136 | Destabilizing | 0.016 | N | 0.261 | neutral | None | None | None | None | N |
T/H | 0.1902 | likely_benign | 0.2189 | benign | -1.422 | Destabilizing | 0.356 | N | 0.325 | neutral | None | None | None | None | N |
T/I | 0.1231 | likely_benign | 0.1514 | benign | -0.039 | Destabilizing | None | N | 0.169 | neutral | N | 0.508027882 | None | None | N |
T/K | 0.1297 | likely_benign | 0.1492 | benign | -1.012 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.504380746 | None | None | N |
T/L | 0.0932 | likely_benign | 0.1103 | benign | -0.039 | Destabilizing | None | N | 0.117 | neutral | None | None | None | None | N |
T/M | 0.0969 | likely_benign | 0.1064 | benign | 0.324 | Stabilizing | 0.002 | N | 0.188 | neutral | None | None | None | None | N |
T/N | 0.1086 | likely_benign | 0.1264 | benign | -1.011 | Destabilizing | 0.038 | N | 0.195 | neutral | None | None | None | None | N |
T/P | 0.2142 | likely_benign | 0.2789 | benign | -0.266 | Destabilizing | 0.055 | N | 0.325 | neutral | D | 0.607771589 | None | None | N |
T/Q | 0.1561 | likely_benign | 0.1782 | benign | -1.068 | Destabilizing | 0.038 | N | 0.331 | neutral | None | None | None | None | N |
T/R | 0.1071 | likely_benign | 0.1225 | benign | -0.832 | Destabilizing | None | N | 0.17 | neutral | N | 0.507557267 | None | None | N |
T/S | 0.096 | likely_benign | 0.1017 | benign | -1.184 | Destabilizing | None | N | 0.13 | neutral | N | 0.45889649 | None | None | N |
T/V | 0.1223 | likely_benign | 0.1427 | benign | -0.266 | Destabilizing | 0.006 | N | 0.207 | neutral | None | None | None | None | N |
T/W | 0.4211 | ambiguous | 0.4734 | ambiguous | -0.673 | Destabilizing | 0.864 | D | 0.326 | neutral | None | None | None | None | N |
T/Y | 0.2177 | likely_benign | 0.2462 | benign | -0.461 | Destabilizing | 0.356 | N | 0.361 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.