Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4632 | 14119;14120;14121 | chr2:178739339;178739338;178739337 | chr2:179604066;179604065;179604064 |
N2AB | 4315 | 13168;13169;13170 | chr2:178739339;178739338;178739337 | chr2:179604066;179604065;179604064 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4269 | 13030;13031;13032 | chr2:178739339;178739338;178739337 | chr2:179604066;179604065;179604064 |
Novex-1 | 4394 | 13405;13406;13407 | chr2:178739339;178739338;178739337 | chr2:179604066;179604065;179604064 |
Novex-2 | 4461 | 13606;13607;13608 | chr2:178739339;178739338;178739337 | chr2:179604066;179604065;179604064 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1225957839 | -0.424 | 0.003 | N | 0.233 | 0.073 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
A/V | rs1225957839 | -0.424 | 0.003 | N | 0.233 | 0.073 | None | gnomAD-4.0.0 | 4.77392E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57437E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5759 | likely_pathogenic | 0.5527 | ambiguous | -1.016 | Destabilizing | 0.973 | D | 0.624 | neutral | None | None | None | None | N |
A/D | 0.7601 | likely_pathogenic | 0.7453 | pathogenic | -1.954 | Destabilizing | 0.782 | D | 0.717 | prob.delet. | N | 0.508414723 | None | None | N |
A/E | 0.6949 | likely_pathogenic | 0.6914 | pathogenic | -1.94 | Destabilizing | 0.704 | D | 0.587 | neutral | None | None | None | None | N |
A/F | 0.7558 | likely_pathogenic | 0.7459 | pathogenic | -1.151 | Destabilizing | 0.826 | D | 0.757 | deleterious | None | None | None | None | N |
A/G | 0.2303 | likely_benign | 0.2543 | benign | -1.449 | Destabilizing | 0.338 | N | 0.571 | neutral | D | 0.536959657 | None | None | N |
A/H | 0.8597 | likely_pathogenic | 0.8485 | pathogenic | -1.712 | Destabilizing | 0.973 | D | 0.76 | deleterious | None | None | None | None | N |
A/I | 0.4523 | ambiguous | 0.4569 | ambiguous | -0.41 | Destabilizing | 0.404 | N | 0.628 | neutral | None | None | None | None | N |
A/K | 0.8419 | likely_pathogenic | 0.8281 | pathogenic | -1.425 | Destabilizing | 0.704 | D | 0.586 | neutral | None | None | None | None | N |
A/L | 0.4901 | ambiguous | 0.4944 | ambiguous | -0.41 | Destabilizing | 0.404 | N | 0.581 | neutral | None | None | None | None | N |
A/M | 0.5384 | ambiguous | 0.5245 | ambiguous | -0.253 | Destabilizing | 0.973 | D | 0.66 | neutral | None | None | None | None | N |
A/N | 0.6916 | likely_pathogenic | 0.6724 | pathogenic | -1.241 | Destabilizing | 0.704 | D | 0.753 | deleterious | None | None | None | None | N |
A/P | 0.4952 | ambiguous | 0.5086 | ambiguous | -0.612 | Destabilizing | 0.879 | D | 0.659 | neutral | N | 0.513042982 | None | None | N |
A/Q | 0.7442 | likely_pathogenic | 0.7474 | pathogenic | -1.366 | Destabilizing | 0.826 | D | 0.644 | neutral | None | None | None | None | N |
A/R | 0.7541 | likely_pathogenic | 0.7467 | pathogenic | -1.088 | Destabilizing | 0.826 | D | 0.657 | neutral | None | None | None | None | N |
A/S | 0.1371 | likely_benign | 0.1378 | benign | -1.559 | Destabilizing | 0.007 | N | 0.263 | neutral | N | 0.497147967 | None | None | N |
A/T | 0.1378 | likely_benign | 0.1172 | benign | -1.456 | Destabilizing | 0.003 | N | 0.288 | neutral | N | 0.508239492 | None | None | N |
A/V | 0.1919 | likely_benign | 0.1898 | benign | -0.612 | Destabilizing | 0.003 | N | 0.233 | neutral | N | 0.497302033 | None | None | N |
A/W | 0.9477 | likely_pathogenic | 0.9411 | pathogenic | -1.618 | Destabilizing | 0.991 | D | 0.777 | deleterious | None | None | None | None | N |
A/Y | 0.8548 | likely_pathogenic | 0.8419 | pathogenic | -1.198 | Destabilizing | 0.906 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.