Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4638 | 14137;14138;14139 | chr2:178739321;178739320;178739319 | chr2:179604048;179604047;179604046 |
N2AB | 4321 | 13186;13187;13188 | chr2:178739321;178739320;178739319 | chr2:179604048;179604047;179604046 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4275 | 13048;13049;13050 | chr2:178739321;178739320;178739319 | chr2:179604048;179604047;179604046 |
Novex-1 | 4400 | 13423;13424;13425 | chr2:178739321;178739320;178739319 | chr2:179604048;179604047;179604046 |
Novex-2 | 4467 | 13624;13625;13626 | chr2:178739321;178739320;178739319 | chr2:179604048;179604047;179604046 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2082072923 | None | 0.994 | D | 0.601 | 0.397 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Y/N | rs376513367 | None | 0.979 | D | 0.614 | 0.43 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/N | rs376513367 | None | 0.979 | D | 0.614 | 0.43 | None | gnomAD-4.0.0 | 3.09865E-06 | None | None | None | None | N | None | 4.00406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.20256E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6859 | likely_pathogenic | 0.7659 | pathogenic | -2.748 | Highly Destabilizing | 0.742 | D | 0.559 | neutral | None | None | None | None | N |
Y/C | 0.2365 | likely_benign | 0.2867 | benign | -1.18 | Destabilizing | 0.994 | D | 0.601 | neutral | D | 0.6309323 | None | None | N |
Y/D | 0.6497 | likely_pathogenic | 0.7249 | pathogenic | -1.755 | Destabilizing | 0.979 | D | 0.627 | neutral | D | 0.592065061 | None | None | N |
Y/E | 0.7924 | likely_pathogenic | 0.8416 | pathogenic | -1.647 | Destabilizing | 0.984 | D | 0.611 | neutral | None | None | None | None | N |
Y/F | 0.1054 | likely_benign | 0.1032 | benign | -1.133 | Destabilizing | 0.003 | N | 0.179 | neutral | N | 0.44824334 | None | None | N |
Y/G | 0.6304 | likely_pathogenic | 0.7069 | pathogenic | -3.089 | Highly Destabilizing | 0.953 | D | 0.613 | neutral | None | None | None | None | N |
Y/H | 0.1747 | likely_benign | 0.2068 | benign | -1.437 | Destabilizing | 0.979 | D | 0.553 | neutral | D | 0.551042499 | None | None | N |
Y/I | 0.4574 | ambiguous | 0.5595 | ambiguous | -1.679 | Destabilizing | 0.59 | D | 0.516 | neutral | None | None | None | None | N |
Y/K | 0.5873 | likely_pathogenic | 0.6705 | pathogenic | -1.434 | Destabilizing | 0.953 | D | 0.611 | neutral | None | None | None | None | N |
Y/L | 0.402 | ambiguous | 0.5237 | ambiguous | -1.679 | Destabilizing | 0.004 | N | 0.292 | neutral | None | None | None | None | N |
Y/M | 0.6463 | likely_pathogenic | 0.7092 | pathogenic | -1.258 | Destabilizing | 0.91 | D | 0.58 | neutral | None | None | None | None | N |
Y/N | 0.2669 | likely_benign | 0.3342 | benign | -1.75 | Destabilizing | 0.979 | D | 0.614 | neutral | D | 0.592065061 | None | None | N |
Y/P | 0.9823 | likely_pathogenic | 0.99 | pathogenic | -2.036 | Highly Destabilizing | 0.984 | D | 0.633 | neutral | None | None | None | None | N |
Y/Q | 0.5882 | likely_pathogenic | 0.6823 | pathogenic | -1.714 | Destabilizing | 0.984 | D | 0.584 | neutral | None | None | None | None | N |
Y/R | 0.4091 | ambiguous | 0.5043 | ambiguous | -0.926 | Destabilizing | 0.984 | D | 0.616 | neutral | None | None | None | None | N |
Y/S | 0.3733 | ambiguous | 0.4593 | ambiguous | -2.278 | Highly Destabilizing | 0.815 | D | 0.609 | neutral | N | 0.506627612 | None | None | N |
Y/T | 0.612 | likely_pathogenic | 0.6943 | pathogenic | -2.077 | Highly Destabilizing | 0.854 | D | 0.594 | neutral | None | None | None | None | N |
Y/V | 0.4628 | ambiguous | 0.5555 | ambiguous | -2.036 | Highly Destabilizing | 0.373 | N | 0.511 | neutral | None | None | None | None | N |
Y/W | 0.4404 | ambiguous | 0.4646 | ambiguous | -0.594 | Destabilizing | 0.984 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.