Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4639 | 14140;14141;14142 | chr2:178739318;178739317;178739316 | chr2:179604045;179604044;179604043 |
N2AB | 4322 | 13189;13190;13191 | chr2:178739318;178739317;178739316 | chr2:179604045;179604044;179604043 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4276 | 13051;13052;13053 | chr2:178739318;178739317;178739316 | chr2:179604045;179604044;179604043 |
Novex-1 | 4401 | 13426;13427;13428 | chr2:178739318;178739317;178739316 | chr2:179604045;179604044;179604043 |
Novex-2 | 4468 | 13627;13628;13629 | chr2:178739318;178739317;178739316 | chr2:179604045;179604044;179604043 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | rs374885319 | -0.911 | 0.379 | N | 0.551 | 0.233 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/I | rs374885319 | -0.911 | 0.379 | N | 0.551 | 0.233 | None | gnomAD-4.0.0 | 6.57099E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5773 | likely_pathogenic | 0.6477 | pathogenic | -2.101 | Highly Destabilizing | 0.617 | D | 0.589 | neutral | None | None | None | None | N |
F/C | 0.3314 | likely_benign | 0.377 | ambiguous | -1.306 | Destabilizing | 0.99 | D | 0.644 | neutral | N | 0.495403542 | None | None | N |
F/D | 0.8927 | likely_pathogenic | 0.9237 | pathogenic | -2.062 | Highly Destabilizing | 0.92 | D | 0.658 | neutral | None | None | None | None | N |
F/E | 0.889 | likely_pathogenic | 0.9188 | pathogenic | -1.859 | Destabilizing | 0.85 | D | 0.657 | neutral | None | None | None | None | N |
F/G | 0.7857 | likely_pathogenic | 0.8382 | pathogenic | -2.541 | Highly Destabilizing | 0.92 | D | 0.654 | neutral | None | None | None | None | N |
F/H | 0.4418 | ambiguous | 0.4533 | ambiguous | -1.101 | Destabilizing | 0.012 | N | 0.448 | neutral | None | None | None | None | N |
F/I | 0.3233 | likely_benign | 0.4106 | ambiguous | -0.702 | Destabilizing | 0.379 | N | 0.551 | neutral | N | 0.514712238 | None | None | N |
F/K | 0.6749 | likely_pathogenic | 0.6976 | pathogenic | -1.499 | Destabilizing | 0.85 | D | 0.658 | neutral | None | None | None | None | N |
F/L | 0.8121 | likely_pathogenic | 0.856 | pathogenic | -0.702 | Destabilizing | 0.004 | N | 0.235 | neutral | N | 0.432341016 | None | None | N |
F/M | 0.6061 | likely_pathogenic | 0.6524 | pathogenic | -0.546 | Destabilizing | 0.85 | D | 0.551 | neutral | None | None | None | None | N |
F/N | 0.7485 | likely_pathogenic | 0.791 | pathogenic | -1.939 | Destabilizing | 0.85 | D | 0.657 | neutral | None | None | None | None | N |
F/P | 0.9917 | likely_pathogenic | 0.9947 | pathogenic | -1.173 | Destabilizing | 0.972 | D | 0.681 | prob.neutral | None | None | None | None | N |
F/Q | 0.7177 | likely_pathogenic | 0.7599 | pathogenic | -1.828 | Destabilizing | 0.92 | D | 0.677 | prob.neutral | None | None | None | None | N |
F/R | 0.4902 | ambiguous | 0.524 | ambiguous | -1.177 | Destabilizing | 0.85 | D | 0.657 | neutral | None | None | None | None | N |
F/S | 0.4444 | ambiguous | 0.525 | ambiguous | -2.628 | Highly Destabilizing | 0.896 | D | 0.624 | neutral | D | 0.555420696 | None | None | N |
F/T | 0.6152 | likely_pathogenic | 0.6867 | pathogenic | -2.308 | Highly Destabilizing | 0.85 | D | 0.626 | neutral | None | None | None | None | N |
F/V | 0.3108 | likely_benign | 0.3784 | ambiguous | -1.173 | Destabilizing | 0.379 | N | 0.571 | neutral | N | 0.489241008 | None | None | N |
F/W | 0.4362 | ambiguous | 0.4605 | ambiguous | 0.161 | Stabilizing | 0.977 | D | 0.556 | neutral | None | None | None | None | N |
F/Y | 0.1517 | likely_benign | 0.1492 | benign | -0.142 | Destabilizing | 0.004 | N | 0.316 | neutral | D | 0.53173352 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.