Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4642 | 14149;14150;14151 | chr2:178739309;178739308;178739307 | chr2:179604036;179604035;179604034 |
N2AB | 4325 | 13198;13199;13200 | chr2:178739309;178739308;178739307 | chr2:179604036;179604035;179604034 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4279 | 13060;13061;13062 | chr2:178739309;178739308;178739307 | chr2:179604036;179604035;179604034 |
Novex-1 | 4404 | 13435;13436;13437 | chr2:178739309;178739308;178739307 | chr2:179604036;179604035;179604034 |
Novex-2 | 4471 | 13636;13637;13638 | chr2:178739309;178739308;178739307 | chr2:179604036;179604035;179604034 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs371961804 | 0.449 | None | N | 0.199 | 0.077 | None | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 1.29199E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs371961804 | 0.449 | None | N | 0.199 | 0.077 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.23E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs371961804 | 0.449 | None | N | 0.199 | 0.077 | None | gnomAD-4.0.0 | 1.97099E-05 | None | None | None | None | N | None | 7.23484E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2436 | likely_benign | 0.2374 | benign | -0.099 | Destabilizing | 0.016 | N | 0.322 | neutral | None | None | None | None | N |
K/C | 0.5145 | ambiguous | 0.5152 | ambiguous | -0.356 | Destabilizing | 0.864 | D | 0.245 | neutral | None | None | None | None | N |
K/D | 0.3465 | ambiguous | 0.3629 | ambiguous | -0.03 | Destabilizing | None | N | 0.247 | neutral | None | None | None | None | N |
K/E | 0.1181 | likely_benign | 0.1219 | benign | 0.03 | Stabilizing | None | N | 0.199 | neutral | N | 0.499831619 | None | None | N |
K/F | 0.5814 | likely_pathogenic | 0.5894 | pathogenic | -0.057 | Destabilizing | 0.628 | D | 0.275 | neutral | None | None | None | None | N |
K/G | 0.3178 | likely_benign | 0.3496 | ambiguous | -0.369 | Destabilizing | 0.016 | N | 0.323 | neutral | None | None | None | None | N |
K/H | 0.206 | likely_benign | 0.2019 | benign | -0.589 | Destabilizing | 0.214 | N | 0.282 | neutral | None | None | None | None | N |
K/I | 0.2161 | likely_benign | 0.2067 | benign | 0.556 | Stabilizing | 0.295 | N | 0.301 | neutral | N | 0.51141481 | None | None | N |
K/L | 0.2539 | likely_benign | 0.259 | benign | 0.556 | Stabilizing | 0.072 | N | 0.367 | neutral | None | None | None | None | N |
K/M | 0.1588 | likely_benign | 0.1533 | benign | 0.134 | Stabilizing | 0.628 | D | 0.281 | neutral | None | None | None | None | N |
K/N | 0.207 | likely_benign | 0.2066 | benign | -0.118 | Destabilizing | None | N | 0.241 | neutral | N | 0.512741741 | None | None | N |
K/P | 0.8578 | likely_pathogenic | 0.8985 | pathogenic | 0.368 | Stabilizing | 0.136 | N | 0.347 | neutral | None | None | None | None | N |
K/Q | 0.0963 | likely_benign | 0.0942 | benign | -0.17 | Destabilizing | 0.002 | N | 0.199 | neutral | N | 0.494365855 | None | None | N |
K/R | 0.0829 | likely_benign | 0.0835 | benign | -0.261 | Destabilizing | None | N | 0.195 | neutral | N | 0.514669587 | None | None | N |
K/S | 0.2412 | likely_benign | 0.2427 | benign | -0.576 | Destabilizing | 0.001 | N | 0.271 | neutral | None | None | None | None | N |
K/T | 0.1094 | likely_benign | 0.0989 | benign | -0.344 | Destabilizing | 0.029 | N | 0.341 | neutral | N | 0.515160847 | None | None | N |
K/V | 0.2145 | likely_benign | 0.2038 | benign | 0.368 | Stabilizing | 0.072 | N | 0.383 | neutral | None | None | None | None | N |
K/W | 0.6576 | likely_pathogenic | 0.6811 | pathogenic | -0.083 | Destabilizing | 0.864 | D | 0.263 | neutral | None | None | None | None | N |
K/Y | 0.443 | ambiguous | 0.4507 | ambiguous | 0.24 | Stabilizing | 0.628 | D | 0.28 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.