Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4643 | 14152;14153;14154 | chr2:178739306;178739305;178739304 | chr2:179604033;179604032;179604031 |
N2AB | 4326 | 13201;13202;13203 | chr2:178739306;178739305;178739304 | chr2:179604033;179604032;179604031 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4280 | 13063;13064;13065 | chr2:178739306;178739305;178739304 | chr2:179604033;179604032;179604031 |
Novex-1 | 4405 | 13438;13439;13440 | chr2:178739306;178739305;178739304 | chr2:179604033;179604032;179604031 |
Novex-2 | 4472 | 13639;13640;13641 | chr2:178739306;178739305;178739304 | chr2:179604033;179604032;179604031 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | None | None | 1.0 | N | 0.732 | 0.181 | None | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85958E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1189 | likely_benign | 0.1221 | benign | -1.245 | Destabilizing | 0.994 | D | 0.581 | neutral | None | None | None | None | N |
L/C | 0.32 | likely_benign | 0.3092 | benign | -0.706 | Destabilizing | 0.727 | D | 0.428 | neutral | None | None | None | None | N |
L/D | 0.4208 | ambiguous | 0.4868 | ambiguous | -0.72 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
L/E | 0.1688 | likely_benign | 0.1842 | benign | -0.723 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/F | 0.1473 | likely_benign | 0.1568 | benign | -0.819 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/G | 0.342 | ambiguous | 0.3907 | ambiguous | -1.529 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
L/H | 0.1516 | likely_benign | 0.1626 | benign | -0.68 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/I | 0.0811 | likely_benign | 0.0802 | benign | -0.557 | Destabilizing | 0.994 | D | 0.493 | neutral | None | None | None | None | N |
L/K | 0.1221 | likely_benign | 0.1235 | benign | -0.864 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/M | 0.0953 | likely_benign | 0.0924 | benign | -0.515 | Destabilizing | 1.0 | D | 0.649 | neutral | D | 0.614940894 | None | None | N |
L/N | 0.2406 | likely_benign | 0.2731 | benign | -0.733 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
L/P | 0.1096 | likely_benign | 0.1073 | benign | -0.754 | Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.50487581 | None | None | N |
L/Q | 0.0942 | likely_benign | 0.1008 | benign | -0.882 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | N | 0.50374149 | None | None | N |
L/R | 0.0973 | likely_benign | 0.0991 | benign | -0.29 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.571020088 | None | None | N |
L/S | 0.1784 | likely_benign | 0.2028 | benign | -1.263 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
L/T | 0.1228 | likely_benign | 0.1294 | benign | -1.154 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/V | 0.0854 | likely_benign | 0.0838 | benign | -0.754 | Destabilizing | 0.992 | D | 0.51 | neutral | D | 0.525801452 | None | None | N |
L/W | 0.2025 | likely_benign | 0.2039 | benign | -0.908 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/Y | 0.271 | likely_benign | 0.2715 | benign | -0.671 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.