Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4648 | 14167;14168;14169 | chr2:178739291;178739290;178739289 | chr2:179604018;179604017;179604016 |
N2AB | 4331 | 13216;13217;13218 | chr2:178739291;178739290;178739289 | chr2:179604018;179604017;179604016 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4285 | 13078;13079;13080 | chr2:178739291;178739290;178739289 | chr2:179604018;179604017;179604016 |
Novex-1 | 4410 | 13453;13454;13455 | chr2:178739291;178739290;178739289 | chr2:179604018;179604017;179604016 |
Novex-2 | 4477 | 13654;13655;13656 | chr2:178739291;178739290;178739289 | chr2:179604018;179604017;179604016 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1372025302 | None | None | N | 0.131 | 0.089 | 0.431490205687 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/A | rs1372025302 | None | None | N | 0.131 | 0.089 | 0.431490205687 | gnomAD-4.0.0 | 4.95986E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78383E-06 | 0 | 0 |
E/Q | None | None | None | N | 0.211 | 0.067 | 0.341460817117 | gnomAD-4.0.0 | 1.59332E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86239E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1019 | likely_benign | 0.108 | benign | -0.026 | Destabilizing | None | N | 0.131 | neutral | N | 0.449979726 | None | None | N |
E/C | 0.6047 | likely_pathogenic | 0.6249 | pathogenic | -0.102 | Destabilizing | 0.676 | D | 0.17 | neutral | None | None | None | None | N |
E/D | 0.1006 | likely_benign | 0.1029 | benign | -0.168 | Destabilizing | 0.012 | N | 0.183 | neutral | N | 0.440456973 | None | None | N |
E/F | 0.505 | ambiguous | 0.5392 | ambiguous | -0.101 | Destabilizing | 0.214 | N | 0.245 | neutral | None | None | None | None | N |
E/G | 0.0695 | likely_benign | 0.0704 | benign | -0.137 | Destabilizing | None | N | 0.132 | neutral | N | 0.437191187 | None | None | N |
E/H | 0.2485 | likely_benign | 0.2664 | benign | 0.458 | Stabilizing | 0.214 | N | 0.185 | neutral | None | None | None | None | N |
E/I | 0.2272 | likely_benign | 0.2463 | benign | 0.208 | Stabilizing | None | N | 0.22 | neutral | None | None | None | None | N |
E/K | 0.0638 | likely_benign | 0.064 | benign | 0.425 | Stabilizing | None | N | 0.085 | neutral | N | 0.429990731 | None | None | N |
E/L | 0.2266 | likely_benign | 0.2516 | benign | 0.208 | Stabilizing | 0.016 | N | 0.233 | neutral | None | None | None | None | N |
E/M | 0.2621 | likely_benign | 0.2881 | benign | 0.037 | Stabilizing | 0.214 | N | 0.197 | neutral | None | None | None | None | N |
E/N | 0.1396 | likely_benign | 0.1515 | benign | 0.286 | Stabilizing | None | N | 0.155 | neutral | None | None | None | None | N |
E/P | 0.2555 | likely_benign | 0.2871 | benign | 0.148 | Stabilizing | 0.136 | N | 0.267 | neutral | None | None | None | None | N |
E/Q | 0.0923 | likely_benign | 0.0967 | benign | 0.285 | Stabilizing | None | N | 0.211 | neutral | N | 0.449346681 | None | None | N |
E/R | 0.1062 | likely_benign | 0.1133 | benign | 0.627 | Stabilizing | 0.016 | N | 0.171 | neutral | None | None | None | None | N |
E/S | 0.1111 | likely_benign | 0.1196 | benign | 0.105 | Stabilizing | 0.007 | N | 0.145 | neutral | None | None | None | None | N |
E/T | 0.1272 | likely_benign | 0.1368 | benign | 0.201 | Stabilizing | 0.031 | N | 0.261 | neutral | None | None | None | None | N |
E/V | 0.1515 | likely_benign | 0.1632 | benign | 0.148 | Stabilizing | 0.012 | N | 0.196 | neutral | N | 0.480818406 | None | None | N |
E/W | 0.6108 | likely_pathogenic | 0.6505 | pathogenic | -0.064 | Destabilizing | 0.864 | D | 0.18 | neutral | None | None | None | None | N |
E/Y | 0.3659 | ambiguous | 0.3909 | ambiguous | 0.121 | Stabilizing | 0.356 | N | 0.251 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.