Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4649 | 14170;14171;14172 | chr2:178739288;178739287;178739286 | chr2:179604015;179604014;179604013 |
N2AB | 4332 | 13219;13220;13221 | chr2:178739288;178739287;178739286 | chr2:179604015;179604014;179604013 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4286 | 13081;13082;13083 | chr2:178739288;178739287;178739286 | chr2:179604015;179604014;179604013 |
Novex-1 | 4411 | 13456;13457;13458 | chr2:178739288;178739287;178739286 | chr2:179604015;179604014;179604013 |
Novex-2 | 4478 | 13657;13658;13659 | chr2:178739288;178739287;178739286 | chr2:179604015;179604014;179604013 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1060500392 | None | None | N | 0.047 | 0.107 | 0.136095386433 | gnomAD-4.0.0 | 6.84606E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09924E-06 | 0 | 1.65772E-05 |
K/N | rs1574063706 | None | 0.001 | N | 0.072 | 0.147 | 0.117506650769 | gnomAD-4.0.0 | 1.36939E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00019E-07 | 0 | 1.65815E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.263 | likely_benign | 0.2609 | benign | -0.658 | Destabilizing | 0.055 | N | 0.291 | neutral | None | None | None | None | N |
K/C | 0.6084 | likely_pathogenic | 0.6156 | pathogenic | -0.297 | Destabilizing | 0.958 | D | 0.461 | neutral | None | None | None | None | N |
K/D | 0.3553 | ambiguous | 0.3562 | ambiguous | -0.317 | Destabilizing | 0.055 | N | 0.312 | neutral | None | None | None | None | N |
K/E | 0.1405 | likely_benign | 0.1465 | benign | -0.195 | Destabilizing | None | N | 0.047 | neutral | N | 0.456798901 | None | None | N |
K/F | 0.617 | likely_pathogenic | 0.6297 | pathogenic | -0.295 | Destabilizing | 0.497 | N | 0.49 | neutral | None | None | None | None | N |
K/G | 0.3608 | ambiguous | 0.3774 | ambiguous | -1.024 | Destabilizing | 0.055 | N | 0.313 | neutral | None | None | None | None | N |
K/H | 0.2636 | likely_benign | 0.2633 | benign | -1.386 | Destabilizing | 0.497 | N | 0.4 | neutral | None | None | None | None | N |
K/I | 0.2231 | likely_benign | 0.2244 | benign | 0.299 | Stabilizing | 0.124 | N | 0.531 | neutral | None | None | None | None | N |
K/L | 0.2519 | likely_benign | 0.2568 | benign | 0.299 | Stabilizing | 0.02 | N | 0.319 | neutral | None | None | None | None | N |
K/M | 0.1457 | likely_benign | 0.1457 | benign | 0.142 | Stabilizing | 0.007 | N | 0.185 | neutral | N | 0.479932667 | None | None | N |
K/N | 0.2082 | likely_benign | 0.2092 | benign | -0.358 | Destabilizing | 0.001 | N | 0.072 | neutral | N | 0.437881034 | None | None | N |
K/P | 0.6143 | likely_pathogenic | 0.632 | pathogenic | 0.008 | Stabilizing | 0.364 | N | 0.455 | neutral | None | None | None | None | N |
K/Q | 0.1345 | likely_benign | 0.1356 | benign | -0.331 | Destabilizing | 0.096 | N | 0.268 | neutral | D | 0.531190107 | None | None | N |
K/R | 0.0964 | likely_benign | 0.0992 | benign | -0.656 | Destabilizing | 0.001 | N | 0.08 | neutral | N | 0.418772909 | None | None | N |
K/S | 0.28 | likely_benign | 0.2824 | benign | -0.877 | Destabilizing | 0.055 | N | 0.213 | neutral | None | None | None | None | N |
K/T | 0.1216 | likely_benign | 0.1166 | benign | -0.55 | Destabilizing | 0.081 | N | 0.349 | neutral | N | 0.446796766 | None | None | N |
K/V | 0.2322 | likely_benign | 0.237 | benign | 0.008 | Stabilizing | 0.124 | N | 0.373 | neutral | None | None | None | None | N |
K/W | 0.6822 | likely_pathogenic | 0.7014 | pathogenic | -0.245 | Destabilizing | 0.958 | D | 0.488 | neutral | None | None | None | None | N |
K/Y | 0.4204 | ambiguous | 0.4289 | ambiguous | None | Stabilizing | 0.667 | D | 0.46 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.