Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4652 | 14179;14180;14181 | chr2:178739279;178739278;178739277 | chr2:179604006;179604005;179604004 |
N2AB | 4335 | 13228;13229;13230 | chr2:178739279;178739278;178739277 | chr2:179604006;179604005;179604004 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4289 | 13090;13091;13092 | chr2:178739279;178739278;178739277 | chr2:179604006;179604005;179604004 |
Novex-1 | 4414 | 13465;13466;13467 | chr2:178739279;178739278;178739277 | chr2:179604006;179604005;179604004 |
Novex-2 | 4481 | 13666;13667;13668 | chr2:178739279;178739278;178739277 | chr2:179604006;179604005;179604004 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs2082064227 | None | 1.0 | N | 0.855 | 0.489 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
C/Y | rs2082064227 | None | 1.0 | N | 0.855 | 0.489 | None | gnomAD-4.0.0 | 6.57229E-06 | None | None | None | None | N | None | 2.41289E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5094 | ambiguous | 0.5647 | pathogenic | -1.878 | Destabilizing | 0.998 | D | 0.539 | neutral | None | None | None | None | N |
C/D | 0.7184 | likely_pathogenic | 0.774 | pathogenic | -0.155 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
C/E | 0.7693 | likely_pathogenic | 0.8175 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
C/F | 0.2115 | likely_benign | 0.2415 | benign | -1.223 | Destabilizing | 1.0 | D | 0.854 | deleterious | N | 0.49650491 | None | None | N |
C/G | 0.2771 | likely_benign | 0.3291 | benign | -2.2 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | D | 0.593103063 | None | None | N |
C/H | 0.4432 | ambiguous | 0.5025 | ambiguous | -2.082 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
C/I | 0.3671 | ambiguous | 0.3923 | ambiguous | -1.038 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
C/K | 0.6726 | likely_pathogenic | 0.7331 | pathogenic | -0.848 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
C/L | 0.4018 | ambiguous | 0.4281 | ambiguous | -1.038 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
C/M | 0.6123 | likely_pathogenic | 0.6282 | pathogenic | -0.039 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
C/N | 0.5065 | ambiguous | 0.5685 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
C/P | 0.7878 | likely_pathogenic | 0.8605 | pathogenic | -1.293 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
C/Q | 0.5681 | likely_pathogenic | 0.6319 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
C/R | 0.3415 | ambiguous | 0.3992 | ambiguous | -0.793 | Destabilizing | 1.0 | D | 0.862 | deleterious | N | 0.508971841 | None | None | N |
C/S | 0.3889 | ambiguous | 0.4635 | ambiguous | -1.526 | Destabilizing | 1.0 | D | 0.782 | deleterious | N | 0.508547372 | None | None | N |
C/T | 0.5054 | ambiguous | 0.5633 | ambiguous | -1.201 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
C/V | 0.389 | ambiguous | 0.4204 | ambiguous | -1.293 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
C/W | 0.4938 | ambiguous | 0.5324 | ambiguous | -1.185 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.593243597 | None | None | N |
C/Y | 0.2242 | likely_benign | 0.2536 | benign | -1.187 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.498258421 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.